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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 08:14:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH029_07004m, 5' end sequence.
AB450710.1:293-315
ATTAGATATATATAATCCTTTCACGTAGAT293GCCTGTTTCCACTTATGCTCACTCTCTTCTGTCAACCCTCAGCCTTGATCATG
SPFV11 Supression Substractive Hybridization cDNA library of pear inoculated with Venturia nashicola Pyrus x bretschneideri cDNA, mRNA sequence.
GO924812.1:145-167
ATTAGATATATATAATCCTTTCACGTAGAT145GCCTGTTTCCACTTATGCTCACTCTCTTCTGTCAACCCTCAGCCTTGATCATG
SPFV37 Supression Substractive Hybridization cDNA library of pear inoculated with Venturia nashicola Pyrus x bretschneideri cDNA, mRNA sequence.
GO924834.1:179-201
ATTAGATATATATAATCCTTTCACGTAGAT179GCCTGTTTCCACTTATGCTCACTCTCTTCTGTCAACCCTCAGCCTTGATCATG
SPFV48 Supression Substractive Hybridization cDNA library of pear inoculated with Venturia nashicola Pyrus x bretschneideri cDNA, mRNA sequence.
GO924844.1:123-145
ATTAGATATATATAATCCTTTCACGTAGAT123GCCTGTTTCCACTTATGCTCACTCTCTTCTGTCAACCCTCAGCCTTGATCATG
Pyrus pyrifolia mRNA, clone: NFW2_18_04, 5' end sequence, expressed in flower bud.
HX763404.1:292-314
ATTAGATATATATAATCCTTTCACGTAGAT292GCCTGTTTCCACTTATGCTCACTCTCTTCTGTCAACCCTCAGCCTTGATCATG
Pyrus pyrifolia mRNA, clone: NFW2_18_58, 5' end sequence, expressed in flower bud.
HX763450.1:292-314
ATTAGATATATATAATCCTTTCACGTAGAT292GCCTGTTTCCACTTATGCTCACTCTCTTCTGTCAACCCTCAGCCTTGATCATG
Pyrus pyrifolia mRNA, clone: NLE1_06_04, 5' end sequence, expressed in leaf bud.
HX766203.1:262-284
ATTAGATATATATAATCCTTTCACGTAGAT262GCCTGTTTCCACTTATGCTCACTCTCTTCTGTCAACCCTCAGCCTTGATCATG
TSA: Pyrus pyrifolia mRNA, contig: contig_1639.
FX432429.1:770-792
ATTAGATATATATAATCCTTTCACGTAGAT770GCCTGTTTCCACTTATGCTCACTCTCTTCTGTCAACCCTCAGCCTTGATCATG
Pyrus pyrifolia mRNA, clone: NFR1_32_41, 5' end sequence, expressed in fruit.
HX748366.1:41-63
CATGATCAAGGCTGAGGGTTGACAGAAGAG41AGTGAGCATAAGTGGAAACAGGCATCTACGTGAAAGGATTATATATATCTAAT
TSA: Pyrus x bretschneideri Unigene70617_XinShao mRNA sequence.
JR656984.1:62-84
CATGATCAAGGCTGAGGGTTGACAGAAGAG62AGTGAGCATAAGTGGAAACAGGCATCTACGTGAAAGGATTATATATATCTAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCCTGTTTCCACTTATGCTCACT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCTGTTTCCACTTATGCTCACT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.992 | 0.983 | search_plus_done; http://172.18.8.135:50400/match?q=GCCTGTTTCCACTTATGCTCACT&k=0&no_gap=0&offset=0&limit=50
1.218 | 0.226 | search_minus_done; http://172.18.8.135:50400/match?q=AGTGAGCATAAGTGGAAACAGGC&k=0&no_gap=0&offset=0&limit=42
1.220 | 0.001 | cgi_end;

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