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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 18:08:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

GR-SE-001-GO-149-H11 Seedlings (EUGR-SE) Eucalyptus grandis cDNA clone GR-SE-001-GO-149-H11 5', mRNA sequence.
HS056070.1:168-195
GCAGCACTTAGAATATATATGATGCCCCAG168GCCTTCTCCTCCCATCTTTTTATTCATCCCCATTCTCCAGACTTCTCAGCCATCTTCA
UR-XY-001_BA-006_H09 Xylem vascular tissue, differentiating (EUUR-XY) Eucalyptus urophylla cDNA clone UR-XY-001_BA-006_H09 5', mRNA sequence.
JK681036.1:195-222
CAGCACTTAGAAATATATATGATGCCCCAG195GCCTTCTCCTCCCATCTTTTTATTCATCCCCATTCTCCAGACTTCTCAGCCATCTTCA
UR-XY-001_BA-026_F08 Xylem vascular tissue, differentiating (EUUR-XY) Eucalyptus urophylla cDNA clone UR-XY-001_BA-026_F08 5', mRNA sequence.
JK682329.1:194-221
CAGCACTTAGAAATATATATGATGCCCCAG194GCCTTCTCCTCCCATCTTTTTATTCATCCCCATTCTCCAGACTTCTCAGCCATCTTCA
EG_Ba072P05.R EG_Ba Eucalyptus grandis genomic 3', genomic survey sequence.
JM739672.1:468-495
GCATCACTTATAATATATATGAAGTCCCAG468GCCTTCTCCTCCCATCTTTTTATTCATCCCCATTCTCCAGACTTCTCATCCAATCTTC
Sequence 7771 from patent US 10760088.
MV637510.1:1731-1758
TGAAGATGGCTGAGAAGTCTGGAGAATGGG1731GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTCTAAGTGCTGC
Sequence 7771 from patent US 11111499.
MY429393.1:1731-1758
TGAAGATGGCTGAGAAGTCTGGAGAATGGG1731GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTCTAAGTGCTGC
partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii.
CT982516.1:108-135
TGAAGATGGCTGAGAAGTCTGGAGAATGGG108GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTCTAAGTGCTGC
partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii.
CT983281.1:83-110
TGAAGATGGCTGAGAAGTCTGGAGAATGGG83GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTCTAAGTGCTGC
partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii.
CT985159.1:83-110
TGAAGATGGCTGAGAAGTCTGGAGAATGGG83GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTCTAAGTGCTGC
partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii.
CT986735.1:108-135
TGAAGATGGCTGAGAAGTCTGGAGAATGGG108GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTCTAAGTGCTGC
partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii.
CT987160.1:83-110
TGAAGATGGCTGAGAAGTCTGGAGAATGGG83GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTCTAAGTGCTGC
partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii.
CT987460.1:83-110
TGAAGATGGCTGAGAAGTCTGGAGAATGGG83GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTCTAAGTGCTGC
Eucalyptus camaldulensis mRNA, clone: Leaf_004_000046A11, 3'-EST.
FY799178.1:235-262
TGAAGATGGCTGAGAGGTCTGGAGAATGGG235GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTCTAAGTGCTGC
Eucalyptus camaldulensis mRNA, clone: Stem_001_000229E01, 3'-EST.
FY829336.1:30-57
GAAGATGGCTGAGAGGTCTGGAGAATGGG30GATGAATAAAAAGATGGGAGGAGAAGGCTGGGGCATCATATATATTCTAAGTGCTGCA
Eucalyptus camaldulensis mRNA, clone: Stem_001_000242G02, 3'-EST.
FY830481.1:321-348
TGAAGATGGCTGAGAGGTCTGGAGAATGGG321GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTCTAAGTGCTGC
Eucalyptus camaldulensis mRNA, clone: Stem_001_000287E10, 3'-EST.
FY833353.1:61-88
TGAAGATGGCTGAGAGGTCTGGAGAATGGG61GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTCTAAGTGCTGC
Eucalyptus camaldulensis mRNA, clone: Stem_001_000304A12, 3'-EST.
FY834580.1:59-86
TGAAGATGGCTGAGAGGTCTGGAGAATGGG59GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTCTAAGTGCTGC
Eucalyptus camaldulensis mRNA, clone: Stem_005_000050H11, 3'-EST.
FY840614.1:90-117
TGAAGATGGCTGAGAAGTCTGGAGAATGGG90GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTCTAAGTGCTGC
GR-TS-001-AF-005-B05 Treated seedlings (EUGR-TS) Eucalyptus grandis cDNA clone GR-TS-001-AF-005-B05 5', mRNA sequence.
HS058698.1:293-320
TGAAGATGGCTGAGAAGTCTGGAGAATGGG293GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTCTAAGTGCTGC
GR-TS-001-GO-065-F03 Treated seedlings (EUGR-TS) Eucalyptus grandis cDNA clone GR-TS-001-GO-065-F03 5', mRNA sequence.
HS063141.1:310-337
TGAAGATGGCTGAGAAGTCTGGAGAATGGG310GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTTCTAAGTGCTG
GR-XY-006-RS-071-D09.R Xylem (EUGR-XY) Eucalyptus grandis cDNA clone GR-XY-006-RS-071-D09.R 5', mRNA sequence.
HS073146.1:140-167
TGAAGATGGCTGAGAAGTCTGGAGAATGGG140GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTCTAAGTGCTGC
GL-XY-001_AF-036_A12 Xylem vascular tissue, differentiating (EUGL-XY) Eucalyptus globulus cDNA clone GL-XY-001_AF-036_A12 5', mRNA sequence.
JK636615.1:129-156
TGAAGATGGCTGAGAAGTCTGGAGAATGGG129GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTCTAAGTGCTGC
GL-XY-001_AF-062_A03 Xylem vascular tissue, differentiating (EUGL-XY) Eucalyptus globulus cDNA clone GL-XY-001_AF-062_A03 5', mRNA sequence.
JK638116.1:3-30
GG3GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTCTAAGTGCTCC
GL-XY-001_CN-062_B09 Xylem vascular tissue, differentiating (EUGL-XY) Eucalyptus globulus cDNA clone GL-XY-001_CN-062_B09 5', mRNA sequence.
JK643232.1:231-258
TGAAGATGGCTGAGAAGTCTGGAGAATGGG231GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTTCTAAGTGCTG
GL-XY-002_CN-018_G02 Xylem vascular tissue, differentiating (EUGL-XY) Eucalyptus globulus cDNA clone GL-XY-002_CN-018_G02 5', mRNA sequence.
JK647353.1:192-219
TGAAGATGGCTGAGAAGTCTGGAGAATGGG192GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTTCTAAGTGCTG
PE-XY-001_MG-027_F06 Xylem vascular tissue, differentiating (EUPE-XY) Eucalyptus pellita cDNA clone PE-XY-001_MG-027_F06 5', mRNA sequence.
JK673942.1:227-254
TGAAGATGGCTGAGAAGTCTGGAGAATGGG227GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTCTAAGTGCTGC
PE-XY-003_CN-006_A08 Xylem vascular tissue, differentiating (EUPE-XY) Eucalyptus pellita cDNA clone PE-XY-003_CN-006_A08 5', mRNA sequence.
JK679539.1:380-407
TGAAGATGGCTGAGAAGTCTGGAGAATGGG380GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTCTAAGTGCTGC
UR-XY-001_BA-007_D12 Xylem vascular tissue, differentiating (EUUR-XY) Eucalyptus urophylla cDNA clone UR-XY-001_BA-007_D12 5', mRNA sequence.
JK681075.1:99-126
TGAAGATGGCTGAGAAGTCTGGAGAATGGG99GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTTCTAAGTGCTG
UR-XY-001_BA-074_G02 Xylem vascular tissue, differentiating (EUUR-XY) Eucalyptus urophylla cDNA clone UR-XY-001_BA-074_G02 5', mRNA sequence.
JK685367.1:155-182
TGAAGATGGCTGAGAAGTCTGGAGAATGGG155GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTTCTAAGTGCTG
UR-XY-001_BA-089_E01 Xylem vascular tissue, differentiating (EUUR-XY) Eucalyptus urophylla cDNA clone UR-XY-001_BA-089_E01 5', mRNA sequence.
JK686422.1:45-72
TGAAGATGGCTGAGAAGTCTGGAGAATGGG45GATGAATAAAAAGATGGGAGGAGAAGGCCTGGGGCATCATATATATTTCTAAGTGCTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCCTTCTCCTCCCATCTTTTTATTCATC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCTTCTCCTCCCATCTTTTTATTCATC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.524 | 0.516 | search_plus_done; http://172.18.8.135:50400/match?q=GCCTTCTCCTCCCATCTTTTTATTCATC&k=0&no_gap=0&offset=0&limit=50
2.545 | 2.021 | search_minus_done; http://172.18.8.135:50400/match?q=GATGAATAAAAAGATGGGAGGAGAAGGC&k=0&no_gap=0&offset=0&limit=46
2.562 | 0.017 | cgi_end;

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