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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-06 10:40:32, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Salix babylonica isolate Saba01F chromosome 3Ab.
CP161348.1:16221531-16221551
CAAATGCAAACAAAGAAAACAAAGAAACAG16221531GCTACAAACTTTGTTGTACCCAACAAAACATGAGAGCATCTCTCTCTCTCT
Salix babylonica isolate Saba01F chromosome 3Bb.
CP161349.1:15316223-15316243
ACCCTCCTTCAAATGCAAACAAAGAAACAG15316223GCTACAAACTTTGTTGTACCCAACAAAACATGAGAGCAACTCTCTCTCACT
Salix babylonica isolate Saba01F chromosome 3Ba.
CP161387.1:16029406-16029426
ACCCTCCTTCAAATGCAAACAAAGAAACAG16029406GCTACAAACTTTGTTGTACCCAACAAAACATGAGAGCAACTCTCTCTCACT
Triticum aestivum genome assembly, chromosome: 7D.
OV100757.1:636521347-636521367
AGCTGGCTTTTGGCTTAACAAGTTTCTTAA636521347GCTACAAACTTTGTTGTACCCATTTACGCGGCCCATGAAAGAGCACACCTC
Triticum aestivum genome assembly, chromosome: 7D.
OW530330.1:636521347-636521367
AGCTGGCTTTTGGCTTAACAAGTTTCTTAA636521347GCTACAAACTTTGTTGTACCCATTTACGCGGCCCATGAAAGAGCACACCTC
Populus nigra genome assembly, chromosome: 8.
OX637679.1:21499287-21499307
TACCCTCTTACAAATGCAAACAAAAAACAG21499287GCTACAAACTTTGTTGTACCCAACAAAACATGAGAGCAACTCTCTCTCTCT
Salix caprea genome assembly, chromosome: 17.
OZ037759.1:13557829-13557849
ACCCTCTTTCAAATGCAAACAAAGAAACAG13557829GCTACAAACTTTGTTGTACCCAACAAAACATGAGAGCAACTCTCTCTCACT
Salix cinerea genome assembly, chromosome: 13.
OZ253429.1:16233713-16233733
ACCCTCTTTCAAATGCAAACAAAGAAACAG16233713GCTACAAACTTTGTTGTACCCAACAAAACATGAGAGCAACTCTCTCTCACT
Salix viminalis genome assembly, chromosome: 12.
OZ287361.1:13686117-13686137
ACCCTCTTTCAAATGCAAACAAAGAAACAG13686117GCTACAAACTTTGTTGTACCCAACAAAACATGAGAGCAACTCTCTCTCACT
Populus nigra mRNA, clone: PnFL2-056_J22, 5'end.
DB884780.1:107-127
AGAGAGAGAGAGTTGCTCTCATGTTTTGTT107GGGTACAACAAAGTTTGTAGCCTGTTTTTTGTTTGCATTTGTAAGAGGGTA
Populus tremula genome assembly, chromosome: 4.
OZ066585.1:447341-447361
AGGGAGAGAGAGTTGCTCTGATGTTTTGTT447341GGGTACAACAAAGTTTGTAGCCTGTTTTTTGTTTGCATTTGTAAGAGGGTA
Aegilops tauschii genome assembly, chromosome: 2.
OZ235099.1:12748490-12748510
TGCTCTTTCATGGGCCGCAGTCCAGTAAAC12748490GGGTACAACAAAGTTTGTAGCTTAAGAAACTTGTTAAGCCAAAGCCAGCTG
Salix herbacea genome assembly, chromosome: 17.
OZ286667.1:362763-362783
AGTGAGAGAGAGTTGCTCTCATGTTTTGTT362763GGGTACAACAAAGTTTGTAGCCTGTTTCTTTGTTTGCATTTGAAAGAGGGT
Triticum aestivum genome assembly, chromosome: 7D.
OZ287243.1:14061044-14061064
TGCTCTTTCATGGGCCGCAGTCCAGTAAAC14061044GGGTACAACAAAGTTTGTAGCTTAAGAAACTTGTTAAGCCAAAGCCAGCTG
Salix viminalis genome assembly, chromosome: 12.
OZ287319.1:351357-351377
AGTGAGAGAGAGTTGCTCTCATGTTTTGTT351357GGGTACAACAAAGTTTGTAGCCTGTTTCTTTGTTTGCATTTGAAAGAGGGT
Salix reticulata genome assembly, chromosome: 15.
OZ287386.1:342027-342047
AGTGAGAGAGAGTTGCTCTCATGTTTTGTT342027GGGTACAACAAAGTTTGTAGCCTGTTTCTTTGTTTGCATTTGAAAGAGGGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTACAAACTTTGTTGTACCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTACAAACTTTGTTGTACCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.380 | 0.371 | search_plus_done; http://172.18.8.135:50900/match?q=GCTACAAACTTTGTTGTACCC&k=0&no_gap=0&offset=0&limit=50
0.829 | 0.450 | search_minus_done; http://172.18.8.135:50900/match?q=GGGTACAACAAAGTTTGTAGC&k=0&no_gap=0&offset=0&limit=41
0.834 | 0.005 | cgi_end;

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