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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:36:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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Homo sapiens chromosome 5 clone RP11-536I7, complete sequence.
AC093296.2:59859-59875
ACTCAAACACACAGCTTGCTTATTCACTCA59859GCTGTGCACTAGGTTTCAGGTTTGAGTTTTAGGGAAAACTGAAAATT
Homo sapiens DNA, chromosome 3, nearly complete genome.
AP023463.1:162948007-162948023
CTATTTTCTTACTTTAAAACAGAATTTTTA162948007GCTGTGCACTAGGTTTCTCAACAAAAGGTTATTTATTACCTCTTTTG
Sciurus vulgaris genome assembly, chromosome: 3.
LR738613.1:32231045-32231061
CAGATCACTTGTATCAACTACAGTAGCCAT32231045GCTGTGCACTAGGTTTCCGTGACTTATTCATCTTATAACTGAGAGTG
Acomys kempi genome assembly, chromosome: 6.
OU015360.1:8146967-8146983
AGGTACATAAATAGGCACTTTTCAGAGTCT8146967GCTGTGCACTAGGTTTCTAGCCAAGCAGAAGCTGTGCTTCTGGTGCT
Capricornis sumatraensis isolate serow.1 chromosome X.
CP135630.1:142121592-142121608
TCTTCTCCCGAGGAGGCTCGCTTCCCGCAT142121592GCTGTGCACTAGGTTTCCAGGCGGGGGCGCCCCGCGCCTCCTACAGG
Capricornis sumatraensis isolate serow.1 chromosome X.
CP135630.1:142130665-142130681
TCTTCTCCCGAGGAGGCTCGCTTCCCGCAT142130665GCTGTGCACTAGGTTTCCAGGCGGGGGCGCCCCGCGCCTCCTACAGG
Capricornis sumatraensis isolate serow.1 chromosome X.
CP135630.1:142283481-142283497
TCTTCTCCCGAGGAGGCTCGCTTCCCGCAT142283481GCTGTGCACTAGGTTTCCAGGCGGGGGCGCCCCGCGCCTCCTACAGG
Capricornis sumatraensis isolate serow.1 chromosome X.
CP135630.1:142300226-142300242
TCTTCTCCCGAGGAGGCTCGCTTCCCGCAT142300226GCTGTGCACTAGGTTTCCAGGCGGGGGCGCCCCGCGCCTCCTACAGG
Capricornis sumatraensis isolate serow.1 chromosome X.
CP135630.1:142316971-142316987
TCTTCTCCCGAGGAGGCTCGCTTCCCGCAT142316971GCTGTGCACTAGGTTTCCAGGCGGGGGCGCCCCGCGCCTCCTACAGG
Capricornis sumatraensis isolate serow.1 chromosome X.
CP135630.1:142331623-142331639
TCTTCTCCCGAGGAGGCTCGCTTCCCGCAT142331623GCTGTGCACTAGGTTTCCAGGCGGGGGCGCCCCGCGCCTCCTACAGG
Capricornis sumatraensis isolate serow.1 chromosome 10.
CP135636.1:45040299-45040315
TCTTCTCCCCAGGAGGCTCGCTTCCCCCAT45040299GCTGTGCACTAGGTTTCCAGGCGGGGGCGCCCCGCGCCTCCAACAGG
Capricornis sumatraensis isolate serow.1 chromosome 10.
CP135636.1:45043801-45043817
TCTTCTCCCCAGGAGGCTCGCTTCCCCCAT45043801GCTGTGCACTAGGTTTCCAGGCGGGGGCGCCCCGCGCCTCCAACAGG
Capricornis sumatraensis isolate serow.1 chromosome 10.
CP135636.1:45256800-45256816
TCTTCTCCCCAGGAGGCTCGCTTCCCGCCT45256800GCTGTGCACTAGGTTTCCAGGCGGAGGCGCCCCGCGCCTCCAACAGG
Capricornis sumatraensis isolate serow.1 chromosome 10.
CP135636.1:45378247-45378263
TCTTCTCCCCAGGAGGCTCGCTTCCCCCAT45378247GCTGTGCACTAGGTTTCCAGGCGGGGGCGCCCCGCGCCTCCAACAGG
Capricornis sumatraensis isolate serow.1 chromosome 10.
CP135636.1:45442727-45442743
TCTTCTCCCCAGGAGGCTCGCTTCCCGCAT45442727GCTGTGCACTAGGTTTCCAGGCGGAGGCGCCCCGCGCCTCCAACAGG
Capricornis sumatraensis isolate serow.1 chromosome 10.
CP135636.1:45454643-45454659
TCTTCTCCCCAGGAGGCTCGCTTCCCGCCT45454643GCTGTGCACTAGGTTTCCAGGCGGAGGCGCCCCGCGCCTCCAACAGG
Capricornis sumatraensis isolate serow.1 chromosome 10.
CP135636.1:45464455-45464471
TCTTCTCCCCAGGAGGCTCGCTTCCCGCCT45464455GCTGTGCACTAGGTTTCCAGGCGGAGGCGCCCCGCGCCTCCAACAGG
Capricornis sumatraensis isolate serow.1 chromosome 10.
CP135636.1:45466557-45466573
TCTTCTCCCCAGGAGGCTCGCTTCCCGCCT45466557GCTGTGCACTAGGTTTCCAGGCGGAGGCGCCCCGCGCCTCCAACAGG
Capricornis sumatraensis isolate serow.1 chromosome 10.
CP135636.1:45607985-45608001
TCTTCTCCCGAGGAGGCTCGCTTCCCGCAT45607985GCTGTGCACTAGGTTTCCAGGCGGGGGCGCCCCGCGCCTCCCACAGG
Capricornis sumatraensis isolate serow.1 chromosome 10.
CP135636.1:45621297-45621313
TCTTCTCCCGAGGAGGTTCGCTTCCCACAT45621297GCTGTGCACTAGGTTTCCAGGCGGGGGCGCCCCGCGCCTCCAACAGG
Canis lupus genome assembly, chromosome: X.
HG994381.1:20803937-20803953
GATAGGCAAGAATAGAGAAGGATGGCATCA20803937GCTGTGCACTAGGTTTCTTGGCTTCTCTAAATGGGCATGTCAGGTGA
Plectropomus leopardus DNA, chromosome 17, nearly complete sequence.
AP022716.1:23463321-23463337
GCTGCATTTTCTTCATGAAAATGTAAGCAG23463321GCTGTGCACTAGGTTTCATCTTTGCACTAACTTTCCTTAAACTGATA
Furcifer pardalis isolate Fpa_1 chromosome 5.
CP126894.1:44584926-44584942
CCTTTTCAATATAGGTAGGTGGCTAGGAGT44584926GCTGTGCACTAGGTTTCATGGAGCAGAGACACTCAAAATTCCATAGA
Gouania willdenowi genome assembly, chromosome: 6.
LR132000.1:14081215-14081231
AAAATGTCCACTGGTTTCTACTAGTGCTTA14081215GCTGTGCACTAGGTTTCAAACCAACACATGGAGACCCCGGCCTGCTA
Microcaecilia unicolor genome assembly, chromosome: 1.
LR594632.1:583074742-583074758
ACCAGTTATGGTTTAGAACTGCAATGCAGT583074742GCTGTGCACTAGGTTTCTCTCAGGGGTTTCTCATTTTAGTGACTCAT
Microcaecilia unicolor genome assembly, chromosome: 1.
LR594632.1:598538278-598538294
CCTTTCTCATGGATGACTTCTCTAAGATGT598538278GCTGTGCACTAGGTTTCAGATTCTGATCTAGAGTCATTTGTTTAGGA
Scyliorhinus canicula genome assembly, chromosome: 6.
LR744035.1:120541903-120541919
GCCTGAGTGCTGAAGATGCTCATCTTGAAT120541903GCTGTGCACTAGGTTTCCTGTCATCAGATACATAATCCAGAAAATAA
Trachurus trachurus genome assembly, chromosome: 24.
LR991647.1:12374197-12374213
TCGAACCATCCCAGTGCTGCTGTTGCTGCT12374197GCTGTGCACTAGGTTTCATTATGTGTCACGCAGCGCAGCAGAAAACG
MAG: Porcine picobirnavirus isolate 15216_NODE_115_len_2473_cov_18.089744 hypothetical protein and capsid protein-like gene, partial sequence.
MW978472.1:454-470
ATGTTGCAAGTTCATTCTCCATGTCAGGAA454GCTGTGCACTAGGTTTCAGCATTGAAGTCAACCTGGTCAGTATCATT
ga19a07.y1 Moss EST library PPU Physcomitrella patens cDNA clone PEP_SOURCE_ID:PPU020913 5', mRNA sequence.
AW126852.1:71-87
AGTCTCTGGCTAAGCTCTCTGAATGAGCTG71GCTGTGCACTAGGTTTCGGAGATATTCGTTGTGTAGTTGCGAAGGTA
gb01e03.y1 Moss EST library PPN Physcomitrella patens cDNA clone PEP_SOURCE_ID:PPN061505 5', mRNA sequence.
AW599050.1:82-98
AGTCTCTGGCTAAGCTCTCTGAATGAGCTG82GCTGTGCACTAGGTTTCGGAGATATTCGTTGTGTAGTTGCGAAGGTA
gb16f12.y1 Moss EST library PPN Physcomitrella patens cDNA clone PEP_SOURCE_ID:PPN101124 5', mRNA sequence.
AW738951.1:221-237
AGTCTCTGGCTAAGCTCTCTGAATGAGCTG221GCTGTGCACTAGGTTTCGGAGATATTCGTTGTGTAGTTGCGAAGGTA
Physcomitrella patens cDNA clone:pphf11h06, 5' end.
BJ940612.1:602-618
AGTCTCTGGCTAAGCTCTCTGAATGAGCTG602GCTGTGCACTAGGTTTCGGAGATATTCGTTGTGTAGTTGCGAAGGTA
CAYY10551.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens cDNA clone CAYY10551 5', mRNA sequence.
FC326783.1:376-392
AGTCTCTGGCTAAGCTCTCTGAATGAGCTG376GCTGTGCACTAGGTTTCGGAGATATTCGTTGTGTAGTTGCGAAGGTA
CAYY27469.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens cDNA clone CAYY27469 5', mRNA sequence.
FC352131.1:262-278
AGTCTCTGGCTAAGCTCTCTGAATGAGCTG262GCTGTGCACTAGGTTTCGGAGATATTCGTTGTGTAGTTGCGAAGGTA
CAYY3043.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens cDNA clone CAYY3043 5', mRNA sequence.
FC356943.1:408-424
AGTCTCTGGCTAAGCTCTCTGAATGAGCTG408GCTGTGCACTAGGTTTCGGAGATATTCGTTGTGTAGTTGCGAAGGTA
CAYY8837.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens cDNA clone CAYY8837 5', mRNA sequence.
FC373706.1:686-702
AGTCTCTGGCTAAGCTCTCTGAATGAGCTG686GCTGTGCACTAGGTTTCGGAGATATTCGTTGTGTAGTTGCGAAGGTA
CAYZ11318.fwd CAYZ Physcomitrella patens subsp. patens Villersexel - regular (L) Physcomitrella patens cDNA clone CAYZ11318 5', mRNA sequence.
FC377699.1:677-693
AGTCTCTGGCTAAGCTCTCTGAATGAGCTG677GCTGTGCACTAGGTTTC
CAYZ8901.fwd CAYZ Physcomitrella patens subsp. patens Villersexel - regular (L) Physcomitrella patens cDNA clone CAYZ8901 5', mRNA sequence.
FC428557.1:270-286
AGTCTCTGGCTAAGCTCTCTGAATGAGCTG270GCTGTGCACTAGGTTTCGGAGATATTCGTTGTGTAGTTGCGAAGGTA
CBAX12051.fwd CBAX Physcomitrella patens subsp. patens Gransden - dessicated (L) Physcomitrella patens cDNA clone CBAX12051 5', mRNA sequence.
FC437843.1:762-778
AGTCTCTGGCTAAGCTCTCTGAATGAACTG762GCTGTGCACTAGGTTTCGGAGAT
TSA: Macaca mulatta Mamu_528781 mRNA sequence.
JU326771.1:4113-4129
TACCATCAGTTCTAGGGAGACCCACCTGCA4113GCTGTGCACTAGGTTTCACTGGGCCAAACTGTGGTAAGACAGTCTGT
TSA: Macaca mulatta Mamu_105084 mRNA sequence.
JV471659.1:706-722
TACCATCAGTTCTAGGGAGACCCACCTGCA706GCTGTGCACTAGGTTTCACTGGGCCAAACTGTGGTAAGACAGTCTGT
TSA: Macaca mulatta Mamu_12338 mRNA sequence.
JV510006.1:2300-2316
TACCATCAGTTCTAGGGAGACCCACCTGCA2300GCTGTGCACTAGGTTTCACTGGGCCAAACTGTGGTAAGACAGTCTGT
TSA: Macaca mulatta Mamu_132834 mRNA sequence.
JV548064.1:409-425
TACCATCAGTTCTAGGGAGACCCACCTGCA409GCTGTGCACTAGGTTTCACTGGGCCAAACTGTGGTAAGACAGTCTGT
TSA: Macaca mulatta Mamu_259032 mRNA sequence.
JV584630.1:2869-2885
TACCATCAGTTCTAGGGAGACCCACCTGCA2869GCTGTGCACTAGGTTTCACTGGGCCAAACTGTGGTAAGACAGTCTGT
TSA: Macaca mulatta Mamu_309391 mRNA sequence.
JV687045.1:183-199
TACCATCAGTTCTAGGGAGACCCACCTGCA183GCTGTGCACTAGGTTTCACTGGGCCAAACTGTGGTAAGACAGTCTGT
TSA: Macaca mulatta Mamu_567396 mRNA sequence.
JV716992.1:4309-4325
TACCATCAGTTCTAGGGAGACCCACCTGCA4309GCTGTGCACTAGGTTTCACTGGGCCAAACTGTGGTAAGACAGTCTGT
Homo sapiens clone RP13-546C24, WORKING DRAFT SEQUENCE, 3 unordered pieces.
AC144533.2:41677-41693
CTATTTTCTTACTTTAAAACAGAATTTTTA41677GCTGTGCACTAGGTTTCTCAACAAAAGGTTATTTATTACCTCTTTTG
Alisma plantago-aquatica genome assembly, chromosome: 2.
OY856410.1:345790412-345790428
AAGGTCTAAGGCTTACTCTACCTCGTGGAG345790412GCTGTGCACTAGGTTTCAGGTTCACCCATGGCTATAAACTACTTAAA
Fragum fragum genome assembly, chromosome: 3.
OX336367.1:73746814-73746830
AATACAAACAAACAATTACACCTGTATTTC73746814GCTGTGCACTAGGTTTCCGCTTAACCTTCCTTTATTTGCATATTGAT
Meconema thalassinum genome assembly, chromosome: 1_1.
OX336388.2:1377861002-1377861018
CTGCATGATACAGCGGTAACATTCTCGCCT1377861002GCTGTGCACTAGGTTTCTTGATCGAATCTTGGTTCAGTCAATTGGCA
Meconema thalassinum genome assembly, chromosome: X.
OX336389.2:239647800-239647816
CTGCGCGGTGCAGAGGTGACGTTCTCGTCT239647800GCTGTGCACTAGGTTTCAGGATCAAATCCTGGCGCAGTCAATTGGCA
Ostrea edulis genome assembly, chromosome: 8.
OX387711.1:46063994-46064010
ATGTGCTGTTTACTATGTTTGATTATATGT46063994GCTGTGCACTAGGTTTCGTTTTCAATCATGTATATTTAGATTGATTT
Ostrea edulis genome assembly, chromosome: 8.
OX387711.1:46653302-46653318
ATGTGCTGTTTACTATGTTTGATTATATGT46653302GCTGTGCACTAGGTTTCGTTTTCAATCATGTATATTTAGATTGATTT
Lochmaea capreae genome assembly, chromosome: 10.
OX421404.1:30824669-30824685
GTCCCTCTTCTATCCAATAATCTCCTAGGT30824669GCTGTGCACTAGGTTTCTGAATTGCTGTACAATTCGCAAATATGTGG
Amaurobius ferox genome assembly, chromosome: 1.
OX578134.1:92410543-92410559
AATGTCACTGATGAAATACATCTTGAATAA92410543GCTGTGCACTAGGTTTCTGTGCATGTAAATGTTATTCTTTGCAATTT
Pseudoips prasinana genome assembly, chromosome: 2.
OX621236.1:9079746-9079762
TCTAGTACAAAAAGATTCTTAAAGTAATGT9079746GCTGTGCACTAGGTTTCATAAAATATTAACAAGTGGACCATGTATAT
Tetanocera ferruginea genome assembly, chromosome: 5.
OY282644.1:26783976-26783992
TGGGCTCCGCAATATTAAAACGTTTGCAAA26783976GCTGTGCACTAGGTTTCCAAGACATTGTTGTGCGTACAATAGTAACG
Helicoverpa armigera genome assembly, chromosome: 7.
OZ005773.1:11768236-11768252
CTCGTTGGCCTAGCTGTCCACAGCGCAGCT11768236GCTGTGCACTAGGTTTCGGGTTTGATTCTCGGGTCGGGCTGAAATCG
Schoenobius gigantella genome assembly, chromosome: 4.
OZ012544.1:2599428-2599444
TTTTGTACATAACCACTTTATAATTCACAA2599428GCTGTGCACTAGGTTTCTGTAGTTTCCTCACTTTTTGGATGGAAATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTGTGCACTAGGTTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTGTGCACTAGGTTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.827 | 0.818 | search_plus_done; http://172.18.8.135:50400/match?q=GCTGTGCACTAGGTTTC&k=0&no_gap=0&offset=0&limit=50
0.965 | 0.138 | search_minus_done; http://172.18.8.135:50400/match?q=GAAACCTAGTGCACAGC&k=0&no_gap=0&offset=0&limit=0
0.965 | 0.000 | cgi_end;

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