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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:14:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Medicago sativa subsp. falcata cultivar Wisfal FZ0_6063 mRNA sequence.
JL887259.1:413-434
TGAGCAAAGATCTCTGGAACTGTGGATTTT413GCTGTTGAAGGAGAGAGTGTTGATTCTGTTGAAGCTGCTGTTGCTGCTGCTG
MBEFR45TF mth2 Medicago truncatula genomic clone 46G18, genomic survey sequence.
CG919575.1:384-405
TGAGCAAAGATCTCTGGAATTGTGGATTTT384GCTGTTGAAGGAGAGAGTGTTGATTCTGTTGAAGCTGCTGTTGCTGCTGCTG
mth2-166B16RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula.
CR492720.1:462-483
TGAGCAAAGATCTCTGGAATTGTGGATTTT462GCTGTTGAAGGAGAGAGTGTTGATTCTGTTGAAGCTGCTGTTGCTGCTGCTG
Trifolium repens isolate ACLI19 chromosome 08_0cc.
CP125850.1:5971524-5971545
TGAGCAAAGATCTCTGGAGCTGTGGATTTT5971524GCTGTTGAAGGAGAGAGTGTTGATTTTGTTGAAGCTGCTGCTGTTGAACTGC
Trifolium subterraneum genome assembly, chromosome: 2.
OX637462.1:59905030-59905051
TGAGCAAAGTTCTCTGGAGCTGTGGATTTT59905030GCTGTTGAAGGAGAGAGTGTTGATTTTGTTGAAGCTGCTGCTGCTGAACTGC
Medicago lupulina genome assembly, chromosome: 5.
OY283143.1:60643756-60643777
TGAGCAAAGATCTCTGGAACTGTGGATTTT60643756GCTGTTGAAGGAGAGAGTGTTGATTCTGTTGAAGCTGCTGTTGCTGCTGCTG
M111086e DSIR Medicago truncatula cDNA clone IR168, mRNA sequence.
AW208053.2:107-128
CAGCAGCAGCAACAGCAGCTTCAACAGAAT107CAACACTCTCTCCTTCAACAGCAAAATCCACAATTCCAGAGATCTTTGCTCA
NF023G05PL1F1037 Phosphate starved leaf Medicago truncatula cDNA clone NF023G05PL 5', mRNA sequence.
BE324936.1:304-325
CAGCAGCAGCAACAGCAGCTTCAACAGAAT304CAACACTCTCTCCTTCAACAGCAAAATCCACAATTCCAGAGATCTTTGCTCA
EST647831 HOGA Medicago truncatula cDNA clone HOGA-33K14, mRNA sequence.
CB895039.1:534-555
CAGCAGCAGCAACAGCAGCTTCAACAGAAT534CAACACTCTCTCCTTCAACAGCAAAATCCACAATTCCAGAGATCTTTGCTCA
s13dNF69D11MJ090_272184 Methyl Jasmonate-Elicited Root Cell Suspension Culture Medicago truncatula cDNA, mRNA sequence.
CX532952.1:336-357
CAGCAGCAGCAACAGCAGCTTCAACAGAAT336CAACACTCTCTCCTTCAACAGCAAAATCCACAATTCCAGAGATCTTTGCTCA
Medicago truncatula chromosome 8 clone mth2-80a22, WORKING DRAFT SEQUENCE, 6 unordered pieces.
AC146708.20:98947-98968
CAGCAGCAGCAACAGCAGCTTCAACAGAAT98947CAACACTCTCTCCTTCAACAGCAAAATCCACAATTCCAGAGATCTTTGCTCA
Trifolium repens isolate ACLI19 chromosome 08_Pall.
CP125851.1:6140566-6140587
GCAGTTCAACAGCAGCAGCTTCAACAAAAT6140566CAACACTCTCTCCTTCAACAGCAAAATCCACAGCTCCAGAGATCTTTGCTCA
Medicago arabica genome assembly, chromosome: 5.
OX326968.1:7697872-7697893
CAGCAGCAGCAGCAGCAGCTTCAACAGAAT7697872CAACACTCTCTCCTTCAACAGCAAAATCCACAACAGTTCCAGAGATCTTTGC
Trifolium dubium genome assembly, chromosome: 2.
OX638063.1:4603089-4603110
GCAGTTCAGCAACAGCAGCTTCAACAAAAC4603089CAACACTCTCTCCTTCAACAGCAAAATCCACAGCTCCAGAGATCTTTGCTCA
Trifolium dubium genome assembly, chromosome: 12.
OX638073.1:3700675-3700696
GCAGTTCAGCAACAGCAGCTTCAACAAAAC3700675CAACACTCTCTCCTTCAACAGCAAAATCCACAGCTCCAGAGATCTTTGCTCA
Trifolium fragiferum genome assembly, chromosome: 4.
OX940792.1:7607611-7607632
CAGCAGCAGCAGCAGCAGCTTCAACAAAAT7607611CAACACTCTCTCCTTCAACAGCAAAATCCACAGCTCCAGAGATCTTTGCTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTGTTGAAGGAGAGAGTGTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTGTTGAAGGAGAGAGTGTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.382 | 0.373 | search_plus_done; http://172.18.8.135:50400/match?q=GCTGTTGAAGGAGAGAGTGTTG&k=0&no_gap=0&offset=0&limit=50
0.557 | 0.175 | search_minus_done; http://172.18.8.135:50400/match?q=CAACACTCTCTCCTTCAACAGC&k=0&no_gap=0&offset=0&limit=44
0.564 | 0.007 | cgi_end;

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