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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 21:39:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Solanum melongena mRNA, clone: PLA05E17, 3'end, expressed in mixture of placenta and immature seed at 10d after anthesis.
FS045376.1:220-239
CTAGAAATAGCAAAGGGATCGGACCAGGAA220GCTTGATTCCCCACAAAGAAAAAAAAGTAAGATTAAAATGATTCAAACCT
TSA: Physalis peruviana Php00a07513.17466 mRNA sequence.
JO141538.1:1062-1081
CTAGAAATAGCAAAGGGATCGGACCAAGAA1062GCTTGATTCCCCACAAAGAATAAAGTGACTTTTAAGAGTCATTCATGAGA
Gallus gallus breed Huxu chromosome 14.
CP100568.1:10620993-10621012
ATTGACAGTCATTTCCCTAAACTGATGTGC10620993TTCTTTGTGGGGAATCAAGCTCCCCTGAATCCTAGGTAAGAGTTTAAATT
Petunia x hybrida EST, clone dr001P0016A04_F.ab1 2007-08-10.
FN005227.1:358-377
TTGAAATGAATGACTCCAAAGTCACTTTTT358TTCTTTGTGGGGAATCAAGCATCGTGGTCCGATTATATCCCTTTGCTATA
Solanum melongena mRNA, clone: PLA05E17, 5'end, expressed in mixture of placenta and immature seed at 10d after anthesis.
FS045375.1:433-452
AGGTTTGAATCATTTTAATCTTACTTTTTT433TTCTTTGTGGGGAATCAAGCTTCCTGGTCCGATCCCTTTGCTATTTCTAG
TSA: Petunia axillaris PETAX015969:Contig1 mRNA sequence.
JI341120.1:38-57
TTGAAATGAATGACTCCAAAGTCACTTTTT38TTCTTTGTGGGGAATCAAGCATCGTGGTCCGATTATATCCCTTTGCTATA
TSA: Petunia integrifolia subsp. inflata PETIN068485:Contig1 mRNA sequence.
JI382282.1:89-108
TGAAATGAATGACTCCAAAGTCACTTTTTT89TTCTTTGTGGGGAATCAAGCATCGTGGTCCGATTATATCCCTTTGCTATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTTGATTCCCCACAAAGAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTTGATTCCCCACAAAGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.286 | 0.278 | search_plus_done; http://172.18.8.135:50400/match?q=GCTTGATTCCCCACAAAGAA&k=0&no_gap=0&offset=0&limit=50
0.605 | 0.318 | search_minus_done; http://172.18.8.135:50400/match?q=TTCTTTGTGGGGAATCAAGC&k=0&no_gap=0&offset=0&limit=48
0.608 | 0.004 | cgi_end;

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