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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:23:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

EG-E11_008_E12 embsomSSHE1, Early somatic embryos (SSH) BAP/no BAP Elaeis guineensis cDNA clone EG-E11_008_E12, mRNA sequence.
JK669210.1:181-200
CAAACCTCCTTGTGGGCATAGGTCCCTGGG181GGAACACACCTGCACTTGAAACAACACTTCTGGCAGAAGAACATGCATGG
TSA: Musa acuminata AAA Group Unigene68440_B1 mRNA sequence.
JV317205.1:79-98
CAAACCTCCTTGTGTGCATAGGTTCCTGGA79GGAACACACCTGCACTTGAAGCAGCACTTCTGGCAGAAGAACAAGCAGGG
Musa acuminata subsp. malaccensis isolate AA chromosome 6.
CP126375.1:768474-768493
CAAACCTCCTTGTGTGCATAGGTTCCTGGA768474GGAACACACCTGCACTTGAAGCAGCACTTCTGGCAGAAGAACAAGCAGGG
Musa acuminata subsp. malaccensis isolate AA chromosome 17.
CP126386.1:768476-768495
CAAACCTCCTTGTGTGCATAGGTTCCTGGA768476GGAACACACCTGCACTTGAAGCAGCACTTCTGGCAGAAGAACAAGCAGGG
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A06.
HG996471.1:756830-756849
CAAACCTCCTTGTGTGCATAGGTTCCTGGA756830GGAACACACCTGCACTTGAAGCAGCACTTCTGGCAGAAGAACAAGCAGGG
Musa schizocarpa genome assembly, chromosome: S06.
LS990921.1:740840-740859
CAAACCTCCTTGTGTGCATAGGTTCCTGGA740840GGAACACACCTGCACTTGAAGCAGCACTTCTGGCAGAAGAACAAGCAGGG
Hipparchia semele genome assembly, chromosome: 13.
OW121721.1:1550367-1550386
AGTTGTGGAGTAAAACTTTAAATTGTTTGA1550367GGAACACACCTGCACTTGAATTCTACTTGACGTGAAAACGTGAATACATA
Felis catus Senzu DNA, chromosome: B1, American Shorthair breed.
AP023155.1:121611069-121611088
TTCATTGCAACTAACAAAAAGTCCAAATAG121611069TTCAAGTGCAGGTGTGTTCCCAGTGGTTTGTGGCTAAAGGACACTGACAG
EG-A11_009_G02 Oil palm abnormal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN600307.1:232-251
CCATGCATGTTCTTCTGCCAGAAGTGTTGT232TTCAAGTGCAGGTGTGTTCCCCCAGGGACCTATGCCCACAAGGAGGTTTG
OPMF01376 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 5-E01-T3.seq, mRNA sequence.
EL685136.1:238-257
CCATGCATGTTCTTCTGCCAGAAGTGTTGT238TTCAAGTGCAGGTGTGTTCCCCCAGGGACCTATGCCCACAAGGAGGTTTG
OPSC00999 Elaeis guineensis Suspension cell cultures Elaeis guineensis cDNA clone 195-E8-T3.seq, mRNA sequence.
EL689225.1:238-257
CCATGCATGTTCTTCTGCCAGAAGTGTTGT238TTCAAGTGCAGGTGTGTTCCCCCAGGGACCTATGCCCACAAGGAGGTTTG
pOP-EO02188_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO02188 5', mRNA sequence.
EY409903.1:244-263
CCATGCATGTTCTTCTGCCAGAAGTGTTGT244TTCAAGTGCAGGTGTGTTCCCCCAGGGACCTATGCCCACAAGGAGGTTTG
EST0004 Lilium regale Wils Flower full-length cDNA Library Lilium regale cDNA 3', mRNA sequence.
GD254342.1:278-297
GCCTGCATGTTCTTCTGCCAGAACTGCTGC278TTCAAGTGCAGGTGTGTTCCTCCGGGGACTTGGGCACATAAGGAGGTATG
Elaeis guineensis EST, clone (6lib)_isotig39548.
LM635403.1:231-250
CCATGCATGTTCTTCTGCCAGAAGTGTTGT231TTCAAGTGCAGGTGTGTTCCCCCAGGGACCTATGCCCACAAGGAGGTTTG
TSA: Elaeis guineensis isotig07551.Elguifruit mRNA sequence.
JO094786.1:124-143
CCATGCATGTTCTTCTGCCAGAAGTGTTGT124TTCAAGTGCAGGTGTGTTCCCCCAGGGACCTATGCCCACAAGGAGGTTTG
Canna indica chromosome 8.
CP136897.1:70357558-70357577
CCCTGCCTGTTCTTCTGTCAGCAGTGTTGC70357558TTCAAGTGCAGGTGTGTTCCTCCAGGTACCTATGCCCACAAGGAGGTCTG
Melanargia galathea genome assembly, chromosome: 2.
OV049856.1:31578790-31578809
TATGGATGCAAGTTCTCCCGTCAAGTAGAA31578790TTCAAGTGCAGGTGTGTTCCTCGAACAATTTAAAGTTTTACTTCACTACT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGAACACACCTGCACTTGAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAACACACCTGCACTTGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.299 | 0.290 | search_plus_done; http://172.18.8.135:50400/match?q=GGAACACACCTGCACTTGAA&k=0&no_gap=0&offset=0&limit=50
0.866 | 0.568 | search_minus_done; http://172.18.8.135:50400/match?q=TTCAAGTGCAGGTGTGTTCC&k=0&no_gap=0&offset=0&limit=43
0.873 | 0.007 | cgi_end;

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