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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:54:38, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB037I10, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC241016.1:107650-107669
TTTATATACAGTATAAATCTATGTAAGTTA107650GGACACAAGATAGAGGTCCTTTTCAAGATCAGCTACTTCAAGATCAGCTA
Brassica rapa subsp. pekinensis clone KBrH088C05, complete sequence.
CU914556.1:14046-14065
TTTATATACAGTATAAATCTATGTAAGTTA14046GGACACAAGATAGAGGTCCTTTTCAAGATCAGCTACTTCAAGATCAGCTA
Brassica napus cultivar Xiang5A chromosome 18.
CP123893.1:76107736-76107755
TTAAAAAAAAGCATAAATCTATGTAAGTTA76107736GGACACAAGATAGAGGTCCTTCCCATGGTGTGACAGCTTGGATGAATGTG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB029G12, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces.
AC241006.1:67565-67584
TAGCTGATCTTGAAGTAGCTGATCTTGAAA67565AGGACCTCTATCTTGTGTCCTAACTTACATAGATTTATACTGTATATAAA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB033I20, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC241012.1:107118-107137
TAGCTGATCTTGAAGTAGCTGATCTTGAAA107118AGGACCTCTATCTTGTGTCCTAACTTACATAGATTTATACTGTATATAAA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB035A14, complete sequence.
AC189315.2:3133-3152
TAGCTGATCTTGAAGTAGCTGATCTTGAAA3133AGGACCTCTATCTTGTGTCCTAACTTACATAGATTTATACTGTATATAAA
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:2251620-2251639
TAGCTGATCTTGAAGTAGCTGATCTTGAAA2251620AGGACCTCTATCTTGTGTCCTAACTTACATAGATTTATACTGTATATAAA
Brassica napus genome assembly, chromosome: C03.
HG994367.1:3099651-3099670
CACATTCATCCAAGCTGTCACACCATGGGA3099651AGGACCTCTATCTTGTGTCCTAACTTACATAGATTTATGCTTTTTTTTAA
Brassica oleracea HDEM genome, scaffold: C3.
LR031872.1:3056559-3056578
CACATTCATCCAAGCTGTCACACCATGGGA3056559AGGACCTCTATCTTGTGTCCTAACTTACATAGATTTATGCTTTTTTTTAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGACACAAGATAGAGGTCCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGACACAAGATAGAGGTCCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.388 | 0.379 | search_plus_done; http://172.18.8.135:50400/match?q=GGACACAAGATAGAGGTCCT&k=0&no_gap=0&offset=0&limit=50
0.477 | 0.089 | search_minus_done; http://172.18.8.135:50400/match?q=AGGACCTCTATCTTGTGTCC&k=0&no_gap=0&offset=0&limit=47
0.482 | 0.004 | cgi_end;

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