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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:29:38, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Canis lupus familiaris breed Labrador retriever chromosome 31a.
CP050592.1:34941083-34941101
AACCAGCACATATGTCCAGACAAATCTGTG34941083GGACACCTCAACTCCATGACTTTTCCAAATGAGCATTTATTTACTGCTC
Canis lupus familiaris breed Labrador retriever chromosome 31b.
CP050617.1:34931613-34931631
AACCAGCACATATGTCCAGACAAATCTGTG34931613GGACACCTCAACTCCATGACTTTTCCAAATGAGCATTTATTTACTGCTC
Meles meles genome assembly, chromosome: 21.
OV277462.1:17997513-17997531
CAATAGATAGGAGACTGACTCTGGCTTTGG17997513GGACACCTCAACTCCATGACTGATGATCTCACCTGTTTGAGGCCCCCAA
Meles meles genome assembly, chromosome: 21.
OV277462.1:18362906-18362924
CAATAGATAGGAGACTGACTCTGGCTTTGG18362906GGACACCTCAACTCCATGACTGATGATCTCACCTGTTTGAGGCCCCCAA
Coregonus sp. 'balchen' genome assembly, chromosome: 28.
LR778280.1:36978749-36978767
TGCAACCAGTCAGGTGGCTCTATCAGCGGT36978749GGACACCTCAACTCCATGACTAGTTTGAAATCCCTCCTGCAGCATCCGA
Larimichthys crocea genome assembly, chromosome: XVI.
LT972182.1:14870104-14870122
TCTTTGCTCACCTCTCACGACAACAGTCCA14870104GGACACCTCAACTCCATGAAAGTATGGAAAGAACTGTCAGTCAGGATAA
Prunus dulcis DNA, pseudomolecule Pd03.
AP019299.1:15397963-15397981
ACCAGAAATCTGATCACCCACGCCTGCGCT15397963GGACACCTCAACTCCATGAACTGTTTGTTGAAGCTGTTGAAAGTCTTGG
Diabrotica balteata genome assembly, chromosome: 4.
OU898279.1:136565431-136565449
AGGATAAGGTGCATGTCATTTTTACAATGG136565431GGACACCTCAACTCCATGACTTGACGACAATCATGATGACAACACGTCA
Canis lupus genome assembly, chromosome: 31.
HG994411.1:4635889-4635907
GAGCAGTAAATAAATGCTCATTTGGAAAAG4635889TCATGGAGTTGAGGTGTCCCACAGATTTGTCTGGACATATGTGCTGGTT
Meles meles genome assembly, chromosome: 21.
OV277462.1:18182168-18182186
TTGGGGGCCTCAAACAGGTGAGATCATCAG18182168TCATGGAGTTGAGGTGTCCCCAAAGCCAGAGTCAGTCTCCTATCTATTG
Meles meles genome assembly, chromosome: 21.
OV277462.1:18547514-18547532
TTGGGGGCCTCAAACAGGTGAGATCATCAG18547514TCATGGAGTTGAGGTGTCCCCAAAGCCAGAGTCAGTCTCCTATCTATTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGACACCTCAACTCCATGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGACACCTCAACTCCATGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.206 | 0.198 | search_plus_done; http://172.18.8.135:50400/match?q=GGACACCTCAACTCCATGA&k=0&no_gap=0&offset=0&limit=50
0.313 | 0.107 | search_minus_done; http://172.18.8.135:50400/match?q=TCATGGAGTTGAGGTGTCC&k=0&no_gap=0&offset=0&limit=42
0.315 | 0.002 | cgi_end;

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