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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:33:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys russatus genome assembly, chromosome: 22.
LR877233.1:10129489-10129506
ACAGGCTATCACAGAGACCACGGGTCCTTG10129489GGACTCAACACAACACAACAGCAGTTTCCAATTAAAAGACTACATCCC
Onychomys leucogaster genome assembly, chromosome: 18.
OX460388.1:63058241-63058258
ATGCCACAGTGAACAGGGAAAAGCCCTGGA63058241GGACTCAACACAACACAAAGAACTAAAGTCAACTAAGGGATGCTTTTG
Onychomys leucogaster genome assembly, chromosome: 18.
OX460435.1:58006900-58006917
ATGCCACAGTGGACAGGGAAAAGCCCTGGA58006900GGACTCAACACAACACAAAGAACTAAAGTCAACGAAGGGATGCTTTTG
Chionomys nivalis genome assembly, chromosome: 24.
OX465472.1:30561671-30561688
AAACCAATGGACACTGCAAGAAACCCATGA30561671GGACTCAACACAACACAAAATAATAGAGGCAACTGAGTAAATCTGGTG
Epinephelus fuscoguttatus DNA, LG14, complete sequence.
AP022688.1:25155876-25155893
ATATTGATCGGCTTCCTGTAACATTCAGTG25155876GGACTCAACACAACACAACATGGTGCATATCAGCTGATAGCAAAAATC
Gadus macrocephalus isolate Gmac_GOA_2020 chromosome 21.
CP133545.1:8288925-8288942
GTTCCAGAGTCTGGCCTCCCAGACCTCGAG8288925GGACTCAACACAACACAACGGGGAGAGCCTTTAAACAACCCGCGGAAA
Mastacembelus armatus genome assembly, chromosome: 4.
LR535836.1:11965071-11965088
TTATTAATGTCAATGTAGTAAAAACAGGCA11965071GGACTCAACACAACACAACTCAGACTCAGAAGGTGTTATTAAACAGTT
Thalassophryne amazonica genome assembly, chromosome: 10.
LR722975.1:86333667-86333684
CCAAAACCCTCAGGGCCACAAGCAGGAGCA86333667GGACTCAACACAACACAAGGTTTGTGCATTTTTCATGTTTCGAAAGCA
Scyliorhinus canicula genome assembly, chromosome: 7.
LR744036.1:54778878-54778895
TTGATATATAGCCAATTCTGTACAGGTGGT54778878GGACTCAACACAACACAAAACCTTAAGTTACTGCAAGTACAACAGATT
Coregonus sp. 'balchen' genome assembly, chromosome: 16.
LR778268.1:2249801-2249818
TTAAATGAGGCAGACACACGCCACAGTCAG2249801GGACTCAACACAACACAAAGCCTGGACAGTATGGACACAGTGAAGTAA
Electrona antarctica genome assembly, chromosome: 4.
OX578249.1:31107144-31107161
GTTACTACTGCTTCCCATTGCCAATGATAA31107144GGACTCAACACAACACAACAGCTTTGCTTGCTTGCCTGGAGATGTTTT
Rutilus rutilus genome assembly, chromosome: 15.
OX637947.1:32109294-32109311
AACAATTATCTTCTTAAATTAAAGGCAATT32109294GGACTCAACACAACACAATCTTTACAACTTAGCAAAGAACCAGTGGTC
Lipophrys pholis genome assembly, chromosome: 5.
OY726537.1:23496648-23496665
ATTTTTCTTCACAAGATTCTTAAGAGTAGT23496648GGACTCAACACAACACAACACAACTCAACAGAAGACCAGACAACCCTG
Gymnoscopelus microlampas genome assembly, chromosome: 10.
OY732712.1:27813252-27813269
ATAACGAGGGAGAATGGTATAGACCCCTGG27813252GGACTCAACACAACACAACACAACACACACACACACACACACACACAC
Sardina pilchardus genome assembly, chromosome: 10.
OY974095.1:27174937-27174954
CACACACACACACATACACACACACTTTTA27174937GGACTCAACACAACACAATGCAACTCTTAAATCCTACCCAGGTGTACA
Sardina pilchardus genome assembly, chromosome: 24.
OY974109.1:7065087-7065104
TGAGGAGCTATCTTTACCTCTCTCTGACCT7065087GGACTCAACACAACACAAACAATCTTACGCTGGGCCAAACAATTTTAC
Protomyctophum bolini genome assembly, chromosome: 6.
OZ001271.1:19229826-19229843
TGGCCATGTTTGACAGCCTCAGCAGCTCAC19229826GGACTCAACACAACACAAAAAATAAAAAAAACTCAAATCCAAAAAAAA
Oryza glaberrima clone OG_BBa0076E03, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces.
AC213140.2:30952-30969
CCAAAAACACCAACCGATTTGACACCATCC30952GGACTCAACACAACACAACAGTTATTACAGTATACACAGCATACATAC
Oryza glaberrima clone OG_BBa0060C01, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC213813.1:38275-38292
CCAAAAACACCAACCGATTTGACACCATCC38275GGACTCAACACAACACAACAGTTATTACAGTATACACAGCATACATAC
Arachis hypogaea cultivar Shitouqi chromosome A08.
CP030990.1:26999766-26999783
TGAGTGGAAGCCTTTGAGGGAAAAAGAGAG26999766GGACTCAACACAACACAACACAAAACACCACACCCTAGCCTATTATTA
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:2972645-2972662
TGAGTGGAAGCCTTTGAGGGAAAAAGAGAG2972645GGACTCAACACAACACAACACAAAACACCACACCCTAGCCTATTATTA
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:2775801-2775818
TGAGTGGAAGCCTTTGAGGGAAAAAGAGAG2775801GGACTCAACACAACACAACACAAAACACCACACCCTAGCCTATTATTA
UNVERIFIED_CONTAM: Avena longiglumis isolate 447 chromosome 3.
CP125975.1:24879239-24879256
GAGAAACAAAAATAAAGATCGTTCGTTTGG24879239GGACTCAACACAACACAACCCAAAAAAGCAAAATAAAAAAAATGACGG
Brassica napus genome assembly, chromosome: C09.
HG994373.1:15154795-15154812
ATATGATTGATATACATCTTCAGAGCACAC15154795GGACTCAACACAACACAACTCTCCACATCCCCTCGACTATAAATATCT
Allium cepa genome assembly, chromosome: 3.
LR994631.1:217167278-217167295
TTTTAGGGACAAGTGTAAGGTCAAGCCCGA217167278GGACTCAACACAACACAAGCAGGCATAAGGTCAAGCCAAAGCAGGCTC
Fagus sylvatica genome assembly, chromosome: 3.
OU015763.1:31493397-31493414
ATTTAAAATAAAATATAAAAAGATACAATA31493397GGACTCAACACAACACAAAATAAGCTTTTTGTGAAAGTGTTGTGAGAT
Luzula sylvatica genome assembly, chromosome: 4.
OX326959.1:43576888-43576905
ATTGCACTATATAAACCAACGAACTTAAGA43576888GGACTCAACACAACACAACACTACACATTATTCAACAATGGCTTCCTC
Scutellaria minor genome assembly, chromosome: 7.
OX940731.1:8851506-8851523
ATGGGATTATGTGCAGAAGCAATCAACCAT8851506GGACTCAACACAACACAACAATAGAAGACAAGGGATTCGAATTTGTTA
Lathyrus sativus genome assembly, chromosome: 3.
OZ012737.1:497582277-497582294
GCAAAGATTTTATTTAAATGAGTATAAAAG497582277GGACTCAACACAACACAAGTGTAATTTAGAATCCTACAATGACATTGG
Lathyrus aphaca genome assembly, chromosome: 5.
OZ014523.1:449655033-449655050
CCCATCCAGTTGTGATAAGTGGACCAAAAG449655033GGACTCAACACAACACAAACACAAGCCTGAAACAGCCCCCAAGCCATA
Nesidiocoris tenuis Japan DNA, chromosome 1, sequence.
AP028909.1:9675794-9675811
TTTTCAACAGATTGTTCTATTTATCGACGG9675794GGACTCAACACAACACAACACAACACAACACAACACAACACAACACAA
Nesidiocoris tenuis Japan DNA, chromosome 1, sequence.
AP028909.1:9678725-9678742
TTTTCAACAGATTGTTCTTTTTATCGACGG9678725GGACTCAACACAACACAACACAACACAACACAACACAACACAACACAA
Grapholita molesta isolate lab01 chromosome gm10.
CP053129.1:10490708-10490725
ACGACTTCAAACACACGAGTGGCGTTAAAA10490708GGACTCAACACAACACAATACTTTTTAACGTGTGGTCTAAGGGTGCAC
3_Tce_b3v08.
OC317349.1:98160-98177
CAGTGGCGGAAAAACAAGGCACTAGCACAG98160GGACTCAACACAACACAACACCCGTGCTCTATTCGCAAAATAGTGGCT
Brachyptera putata genome assembly, chromosome: 6.
OU015467.1:23068303-23068320
AACCGCAATTTCGAAATTTTCAAGTTGAAC23068303GGACTCAACACAACACAATTTCAAACTCACTGAATGTAAATGTTATTC
Lineus longissimus genome assembly, chromosome: 3.
OU342994.1:20226342-20226359
GTACTCAACATGACAGTAAAGCATCTAAGT20226342GGACTCAACACAACACAACTGGAAATAGATAGGACATCATATCTAAAG
Pyrgus malvae genome assembly, chromosome: 22.
OU426968.1:3285868-3285885
TGAAAATCATTTTTGTATGATTTACACGAG3285868GGACTCAACACAACACAACGGATCCTTTGTAGTTAATCAGAAACCAGC
Chrysotoxum bicinctum genome assembly, chromosome: 3.
OU426989.1:61163216-61163233
AATGCGAATGAGGCTTTCATCAGCAAGCAA61163216GGACTCAACACAACACAACACAACGCAACACAAACATCTAAGGACATT
Pammene fasciana genome assembly, chromosome: 12.
OU452284.1:11274655-11274672
ACGACTTCAAACACACGAGTGGCGTTAAAA11274655GGACTCAACACAACACAATACTTTTTAACGTGTGGTCTAAGGCGCAGA
Selenia dentaria genome assembly, chromosome: 15.
OU862890.1:10038269-10038286
AAGATAATTGTTTTTAAATGTCAAATATCT10038269GGACTCAACACAACACAACAGTACTGAAGTCCGAAGTGACACAGTCAG
Epinotia nisella genome assembly, chromosome: 10.
OW028683.1:14056400-14056417
ACGACTCCAAACACACGAGTGGCGTTAAAA14056400GGACTCAACACAACACAATACTTTTTAACGTGTGGTCTAAGGGCACAC
Rutpela maculata genome assembly, chromosome: 3.
OW386287.2:35667316-35667333
GATGATGAGCATTAATTCGGTTTCAAGAAA35667316GGACTCAACACAACACAACAGATTGTTAGGATAGTTAACGATGTCAAG
Epinotia demarniana genome assembly, chromosome: 13.
OX244272.1:17273195-17273212
ACGACTCCAAACACGCGAGTGGCGTTAAAA17273195GGACTCAACACAACACAATACTTTTTAACGTGTGGTCTAAGGATACAA
Melanchra persicariae genome assembly, chromosome: 5.
OX376648.1:12743977-12743994
GTCGATAACAATTAAGGCTTAATCAATTTT12743977GGACTCAACACAACACAACAAGTTTTGAACATACACATCCAATGGACG
Epinotia ramella genome assembly, chromosome: 12.
OX388212.1:18453063-18453080
ACGACTTCAAACACGCGAGTGGCGTTAAAA18453063GGACTCAACACAACACAATAATAACGTGTGGTCTAAGAGCACAAACTT
Epinotia ramella genome assembly, chromosome: 12.
OX388212.1:18462808-18462825
ACGACTTCAAACACGCGAGTGGCGTTAAAA18462808GGACTCAACACAACACAATAATAACGTGTGGTCTAAGAGCACAAACTT
Lathronympha strigana genome assembly, chromosome: 10.
OX421911.1:12572090-12572107
ACGACTTCAAACACACGAGTGGCGTTAAAA12572090GGACTCAACACAACACAATACTTTTTAACGTATGGTCTAAGGTGCAGA
Agrotis exclamationis genome assembly, chromosome: 2.
OX465418.1:21149654-21149671
ATGTTGACCTAAATAAATGTATCTGTGGCT21149654GGACTCAACACAACACAACCACATGTTCAACGCTGGCCATATGAACAA
Sphenella marginata genome assembly, chromosome: 4.
OX608081.1:62738006-62738023
TCCATGCTTAGTTTTAAGCTGGAATCTCTT62738006GGACTCAACACAACACAAATTCTGTACTACCAACACACTTCACAGGTT
Ophion costatus genome assembly, chromosome: 10.
OX632365.1:9572218-9572235
CACGATAAAATTTTTTTTTTTAGCATCGCC9572218GGACTCAACACAACACAAAGCACTATTTTTGGCACTGTGCTTTTTTGG
Eucosma cana genome assembly, chromosome: 12.
OX637484.1:13076464-13076481
ACGACTTCAAACACGCGAGTGGCGTTAAAA13076464GGACTCAACACAACACAATACTTTTTAACGTGTGGTGTAAGGTCTGTG
Linnaemya tessellans genome assembly, chromosome: 5.
OX637536.1:59792233-59792250
TAAATTTGTGTATTTTCAATAATAATGTAA59792233GGACTCAACACAACACAATCACCGGCCAGCCAAATGCACACTGGCTAG
Hydrotaea cyrtoneurina genome assembly, chromosome: 3.
OY282514.1:42596716-42596733
ATCCACATCCGCATCCAAATGCCATGCATT42596716GGACTCAACACAACACAACTCGGCATTGGTATGTGGATGTAGGAATAA
Cheilosia grossa genome assembly, chromosome: 5.
OY720148.1:48542853-48542870
ATTAAAAGAGTTGAGTCCATATAACAACGA48542853GGACTCAACACAACACAAATTGAGATCAATTTCTGACAGCATTCGCAC
Ceriagrion tenellum genome assembly, chromosome: 5.
OY720636.1:109108204-109108221
GAAGGATGCCATTGGTGCCGCCTCGATGCG109108204GGACTCAACACAACACAAGAAGCGCACACACAGTGTTGTCGATATTTT
Stenodema calcarata genome assembly, chromosome: 13.
OY986060.1:8602245-8602262
CATGGTCAATTTAAGTTTCAATTTCAACAG8602245GGACTCAACACAACACAAAAACGCGGATACTTTTTAGCCAACAACAGC
Cepaea hortensis genome assembly, chromosome: 3.
OY992878.1:130641622-130641639
CAATATCCCGAGTGCTGTGATGTCGGTTCT130641622GGACTCAACACAACACAACTTAAATAAATACTCTTAAAATAAATAATA
Cepaea hortensis genome assembly, chromosome: 12.
OY992887.1:57533926-57533943
TAAATGTCCCGAGTGCTGTAAATCGGTTCT57533926GGACTCAACACAACACAACTCAACTCATGATACTCGTAACTGACGTGC
Chrysotoxum festivum genome assembly, chromosome: 3.
OZ007556.1:56897072-56897089
AATGCGAATGAGGCTTTCATCAGCAAGCAA56897072GGACTCAACACAACACAACGCAACACAAACATCTAAGGACATTCATTT
Dregea volubilis virus 4 isolate DvV4/YN, complete genome.
MZ813181.1:70-87
CAATTGCGAAGAATCTTAGGATTCTTAAGA70GGACTCAACACAACACAACCAAACACGATCAAGCACAAACTATCGACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGACTCAACACAACACAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGACTCAACACAACACAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.452 | 0.443 | search_plus_done; http://172.18.8.135:50400/match?q=GGACTCAACACAACACAA&k=0&no_gap=0&offset=0&limit=50
0.572 | 0.121 | search_minus_done; http://172.18.8.135:50400/match?q=TTGTGTTGTGTTGAGTCC&k=0&no_gap=0&offset=0&limit=0
0.572 | 0.000 | cgi_end;

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