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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-08 02:50:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Arabidopsis thaliana cDNA clone:RAFL08-09-K22, 3'-end.
AV793670.1:221-240
TAGAGATAGAGTTGGTCTTGAACAGTTGCT221GGAGGACTTGAGGATGAGGATGTCCAAGGCGTCTGTGCCACACTTCATCA
Cepaea hortensis genome assembly, chromosome: 18.
OY992893.1:79010725-79010744
GAGGAAGAGTTGAGGAAGGGGAGTTGAGGA79010725GGAGGACTTGAGGATGAGGACTTGAGGAGGAGGAGGAGTTGAGGAGGAGG
Ziziphus jujuba cultivar Dongzao chromosome 8.
CP134458.1:2721674-2721693
TTTCTGAAAACTCCTTGACCCTTTCTTTCT2721674TCCTCATCCTCAAGTCCTCCAAAAAAGGTTTAATGGCAGATATTTGGTCC
Viola odorata genome assembly, chromosome: 6.
OY829542.1:57122174-57122193
CTTTGCCTCCTCCTGTTCCGCTCCGCTCCC57122174TCCTCATCCTCAAGTCCTCCCTCAAAGACCCTCTCAACACTCTCCAAGAC
Viola odorata genome assembly, chromosome: 9.
OY829545.1:58160338-58160357
CTTCGCCTCTTCCTGTTCCCGTCCGCTCCC58160338TCCTCATCCTCAAGTCCTCCCTCAAAGACCCTTTCAACACTCTCCAAGGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGAGGACTTGAGGATGAGGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAGGACTTGAGGATGAGGA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.394 | 0.385 | search_plus_done; http://172.18.8.135:50400/match?q=GGAGGACTTGAGGATGAGGA&k=0&no_gap=0&offset=0&limit=50
0.489 | 0.095 | search_minus_done; http://172.18.8.135:50400/match?q=TCCTCATCCTCAAGTCCTCC&k=0&no_gap=0&offset=0&limit=48
0.492 | 0.002 | cgi_end;

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