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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:36:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

AT_SBa0001M08.f AT__SBa Amborella trichopoda genomic clone AT_SBa0001M08 5', genomic survey sequence.
HR617539.1:541-560
AAAAGCGGTGCTGTGGAGCCCATGTAGGAG541GGAGTGTGCATCTTCCCAGTTTCAATTTCAAGGAGTTCTGCGCTTAGAGA
AT_SBa0052C01.f AT__SBa Amborella trichopoda genomic clone AT_SBa0052C01 5', genomic survey sequence.
HR653444.1:543-562
AAAAGCGGTGCTGTGGAGCCCATGTAGGAG543GGAGTGTGCATCTTCCCAGTTTCAATTTCAAGGAGTTCTGCGCTTAGAGA
Octopus vulgaris genome assembly, chromosome: 5.
OX597818.1:28638514-28638533
TGCAGCATTGTATGTTCTTTTCTGCTGTTG28638514GGAGTGTGCATCTTCCCAGTACTGTACTGTATTAACTTTTTTTCCCTTGA
Octopus vulgaris genome assembly, chromosome: 5.
OX597818.1:28815006-28815025
TGCAGCATTGTATGTTCTTTTCTGCTGTTG28815006GGAGTGTGCATCTTCCCAGTACTGTACTGTATTAACTTTTTTTCCCTTGA
Octopus vulgaris genome assembly, chromosome: 28.
OX597841.1:8020456-8020475
TGCAGCATTGTATGTTCTTTTCTGCTGTTG8020456GGAGTGTGCATCTTCCCAGTACTCTACTGTATTACCTTTTTTTCCCTTGA
Atr02b_72_H01_C011.g1 FGP Female Amborella trichopoda Amborella trichopoda cDNA clone 122Dhq_P02 5', mRNA sequence.
FD438566.1:347-366
TCTCTAAGAGCAGAACTCCTTGAAATTGAA347ACTGGGAAGATGCACACTCCCTCCTACATGGGCTCCACAGCACCGCTTTT
Octopus vulgaris genome assembly, chromosome: 28.
OX597841.1:10720405-10720424
TCAAGGGAAAAAAAGGTAATACAGTAGAGT10720405ACTGGGAAGATGCACACTCCCAACAGCAGAAAAGAACATACAATGCTGCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGAGTGTGCATCTTCCCAGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAGTGTGCATCTTCCCAGT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.344 | 0.336 | search_plus_done; http://172.18.8.135:50400/match?q=GGAGTGTGCATCTTCCCAGT&k=0&no_gap=0&offset=0&limit=50
0.483 | 0.138 | search_minus_done; http://172.18.8.135:50400/match?q=ACTGGGAAGATGCACACTCC&k=0&no_gap=0&offset=0&limit=45
0.484 | 0.002 | cgi_end;

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