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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-06 06:31:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Musa acuminata subsp. malaccensis isolate AA chromosome 4.
CP126373.1:37424255-37424274
TGACAGAAGAGAGAGAGCATGTTTCGATGG37424255GGATGGCAACCATCTCATCTGATCTGGAAGTGCTTGTACGTGGGCTTCCC
Musa acuminata subsp. malaccensis isolate AA chromosome 15.
CP126384.1:37392323-37392342
TGACAGAAGAGAGAGAGCATGTTTCGATGG37392323GGATGGCAACCATCTCATCTGATCTGGAAGTGCTTGTACGTGGGCTTCCC
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A01.
HG996466.1:2585379-2585398
TGACAGAAGAGAGAGAGCATGTTTCGATGG2585379GGATGGCAACCATCTCATCTGATCTGGAAGTGCTTGTACGTGGGCTTCCC
Musa schizocarpa genome assembly, chromosome: S01.
LS990915.1:2675206-2675225
TGACAGAAGAGAGAGAGCATGTTTCGATGG2675206GGATGGCAACCATCTCATCTGATCTGGAAGTGCTTGTACGTGGGCTTCCC
EST1233015 ESTSYN-F Musa acuminata AAA Group cDNA clone pESTSYNF-8N18 5', mRNA sequence.
ES432808.1:493-512
GGGAAGCCCACGTACAAGCACTTCCAGATC493AGATGAGATGGTTGCCATCCCCATCGAAACATGCTCTCTCTCTTCTGTCA
Comarum palustre genome assembly, chromosome: 9.
OX637580.1:20663878-20663897
ATGATCTCATGGTTTTTTCTGTGACATTAA20663878AGATGAGATGGTTGCCATCCAAACTCCAAACTACCGGTGCAAGATTTTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGATGGCAACCATCTCATCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGATGGCAACCATCTCATCT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.339 | 0.330 | search_plus_done; http://172.18.8.135:50400/match?q=GGATGGCAACCATCTCATCT&k=0&no_gap=0&offset=0&limit=50
0.541 | 0.202 | search_minus_done; http://172.18.8.135:50400/match?q=AGATGAGATGGTTGCCATCC&k=0&no_gap=0&offset=0&limit=46
0.543 | 0.002 | cgi_end;

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