GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:07:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Daucus carota subsp. sativus cultivar DH1 chromosome 2.
CP093344.1:36127868-36127887
TTGTATCGAGTCTTGGAGAAGGGTTACAAT36127868TCCATGCCTTTTAATGTGCCAGGAACTCCATTTCACAAAGCAATGAATGT
Daucus carota isolate Kuroda chromosome 2.
CP125302.1:33905039-33905058
TTGTATCGAGTCTTGGAGAAGGGTTACAAT33905039TCCATGCCTTTTAATGTGCCAGGAACTCCATTTCACAAAGCAATGAATGT
Chamaenerion angustifolium genome assembly, chromosome: 13.
OX328277.1:20927983-20928002
GGGGATGATACTATGACACAGATAGGAATA20927983TCCATGCCTTTTAATGTGCCTTTTAATGACGGTGGAATTATTTGCATTCT
Hordeum bulbosum genome assembly, chromosome: 7H_2.
OY737405.1:171630845-171630864
CATTCACATTGATATCTATTAAGAGGCATC171630845TCCATGCCTTTTAATGTGCCTAGTCAATGTGACCATCTTCTCCTTTTTGT
Asterias amurensis isolate Qingdao Taiping Cape Park chromosome 11.
CP134962.1:10862863-10862882
TACATTTATTTTGAGTAATTACCAATAGTT10862863TCCATGCCTTTTAATGTGCCCTACTTTTAGAAGAGCCATGAGGTAGGCTG
Glyphotaelius pellucidus genome assembly, chromosome: 16.
OW386553.1:11497452-11497471
GGTCTGAGAAAACGGCATTCAAAGTTCGAC11497452TCCATGCCTTTTAATGTGCCCCCATGCAATTGGTGATTTTTAAAAGCCGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGCACATTAAAAGGCATGGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCACATTAAAAGGCATGGA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.170 | 0.162 | search_plus_done; http://172.18.8.135:50400/match?q=GGCACATTAAAAGGCATGGA&k=0&no_gap=0&offset=0&limit=50
0.260 | 0.090 | search_minus_done; http://172.18.8.135:50400/match?q=TCCATGCCTTTTAATGTGCC&k=0&no_gap=0&offset=0&limit=50
0.265 | 0.004 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).