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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-12 07:20:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KR 1020110020307-A/1: Genetically modified plant capable of biosynthesizing capsinoid.
DI222078.1:1204-1224
CATAATTGGGGAGATAAGGGGAACTGGTTT1204GGCACTTTCTACAGAGTTTGTGAACAATAAATCTCCTAATGATCCCTTTCC
WO 2009157376-A/1: Capsinoid Biosynthesizing Genetically Modified Plants.
FV528570.1:1204-1224
CATAATTGGGGAGATAAGGGGAACTGGTTT1204GGCACTTTCTACAGAGTTTGTGAACAATAAATCTCCTAATGATCCCTTTCC
JP 2010000067-A/1: A screening method for a plant that biosynthesizes a capsinoid.
FW298733.1:1128-1148
CATAATTGGGGAGATAAGGGGAACTGGTTT1128GGCACTTTCTACAGAGTTTGTGAACAATAAATCTCCTAATGATCCCTTTCC
JP 2010000067-A/12: A screening method for a plant that biosynthesizes a capsinoid.
FW298744.1:1-21
1GGCACTTTCTACAGAGTTTGTGAA
Sequence 1 from patent US 9340795.
HL818863.1:1204-1224
CATAATTGGGGAGATAAGGGGAACTGGTTT1204GGCACTTTCTACAGAGTTTGTGAACAATAAATCTCCTAATGATCCCTTTCC
TSA: Capsicum annuum MGMT_Contig28248, mRNA sequence.
JW078492.1:1229-1249
CATAATTGGGGAGATAAGGGGAACTGGTTT1229GGCACTTTCTACAGAGTTTGTGAACAATAAATCTCCTAATGATCCCTTTCC
Capsicum chinense strain habanero putative aminotransferase mRNA, complete cds.
AF085149.1:1204-1224
CATAATTGGGGAGATAAGGGGAACTGGTTT1204GGCACTTTCTACAGAGTTTGTAGACAATAAATCTCCTAATGATCCCTTTCC
Capsicum annuum cultivar Yidu-Red putative aminotransferase mRNA, complete cds.
HM991733.1:1128-1148
CATAATTGGGGAGATAAGGGGAACTGGTTT1128GGCACTTTCTACAGAGTTTGTGAACAATAAATCTCCTAATGATCCCTTTCC
Capsicum chinense pAMT gene for putative aminotransferase, complete cds, cultivar: habanero.
LC032106.1:9110-9130
TTTTTTAATAAAGATAAGGGGAACTGGTTT9110GGCACTTTCTACAGAGTTTGTAGACAATAAATCTCCTAATGATCCCTTTCC
Capsicum chinense DNA, pAMT (putative aminotransferase) gene contains 5bp insertion in 8th exon, complete sequence, cultivar: Belize Sweet.
LC032107.1:9114-9134
TTTTTTAATAAAGATAAGGGGAACTGGTTT9114GGCACTTTCTACAGAGTTTGTAGACAATAAATCTCCTAATGATCCCTTTCC
Capsicum chinense DNA, pAMT (putative aminotransferase) gene contains insertion before 6th exon, complete sequence, cultivar: Zavory Hot.
LC032108.1:11408-11428
TTTTTTAATAAAGATAAGGGGAACTGGTTT11408GGCACTTTCTACAGAGTTTGTAGACAATAAATCTCCTAATGATCCCTTTCC
Capsicum chinense DNA, pAMT (putative aminotransferase) gene contains 8bp insertion in 6th exon, complete sequence, cultivar: Aji Dulce strain2.
LC032109.1:11742-11762
TTTTTTAATAAAGATAAGGGGAACTGGTTT11742GGCACTTTCTACAGAGTTTGTAGACAATAAATCTCCTAATGATCCCTTTCC
Capsicum chinense DNA, pAMT (putative aminotransferase) gene contains 2.8 kb insertion in 2nd exon, complete sequence, cultivar: LP6.
LC032110.1:11939-11959
TTTTTTAATAAAGATAAGGGGAACTGGTTT11939GGCACTTTCTACAGAGTTTGTAGACAATAAATCTCCTAATGATCCCTTTCC
Capsicum chinense pAMT gene, complete sequence, strain: No.4034.
LC273300.1:9111-9131
TTTTTTAATAAAGATAAGGGGAACTGGTTT9111GGCACTTTCTACAGAGTTTGTAGACAATAAATCTCCTAATGATCCCTTTCC
Capsicum annuum Color Piman Yellow pAMT mRNA for putative aminotransferase, complete cds.
LC423554.1:1128-1148
CATAATTGGGGAGATAAGGGGAACTGGTTT1128GGCACTTTCTACAGAGTTTGTGAACAATAAATCTCCTAATGATCCCTTTCC
Capsicum chinense Devil's Yellow pAMT gene for putative aminotransferase, complete cds.
LC483648.1:13692-13712
TTTTTTAATAAAGATAAGGGGAACTGGTTT13692GGCACTTTCTACAGAGTTTGTAGACAATAAATCTCCTAATGATCCCTTTCC
Capsicum chinense LP13 pAMT gene for putative aminotransferase, complete cds.
LC483649.1:13728-13748
TTTTTTAATAAAGATAAGGGGAACTGGTTT13728GGCACTTTCTACAGAGTTTGTAGACAATAAATCTCCTAATGATCCCTTTCC
Capsicum annuum cv. CH-19 sweet pAMT mRNA for putative aminotransferase, complete cds.
LC744758.1:1128-1148
CATAATTGGGGAGATAAGGGGAACTGGTTT1128GGCACTTTCTACAGAGTTTGTGAACAATAAATCTCCTAATGATCCCTTTCC
Capsicum annuum cv. Yume-matsuri pAMT mRNA for putative aminotransferase, complete cds.
LC744759.1:1128-1148
CATAATTGGGGAGATAAGGGGAACTGGTTT1128GGCACTTTCTACAGAGTTTGTGAACAATAAATCTCCTAATGATCCCTTTCC
Capsicum baccatum cv. Super pAMT mRNA for putative aminotransferase, complete cds.
LC744760.1:1128-1148
CATAATTGGGGAGATAAGGGGAACTGGTTT1128GGCACTTTCTACAGAGTTTGTAGACAATAAATCTCCTAATGATCCCTTTCC
KS15060A01 KS15 Capsicum annuum cDNA, mRNA sequence.
GD069000.1:393-413
GGAAAGGGATCATTAGGAGATTTATTGTTC393ACAAACTCTGTAGAAAGTGCCAAACCAGTTCCCCTTATCTCCCCAATTATG
TSA: Capsicum annuum CM_MegaContig_13621 mRNA sequence.
JW101124.1:478-498
GGAAAGGGATCATTAGGAGATTTATTGTCT478ACAAACTCTGTAGAAAGTGCCAAACCAGTTCCCCTTATCTCCCCAATTATG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:253852905-253852925
GGAAAGGGATCATTAGGAGATTTATTGTTC253852905ACAAACTCTGTAGAAAGTGCCAAACCAGTTCCCCTTATCTTTATTTAAAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGCACTTTCTACAGAGTTTGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCACTTTCTACAGAGTTTGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.505 | 0.496 | search_plus_done; http://172.18.8.135:50400/match?q=GGCACTTTCTACAGAGTTTGT&k=0&no_gap=0&offset=0&limit=50
0.713 | 0.207 | search_minus_done; http://172.18.8.135:50400/match?q=ACAAACTCTGTAGAAAGTGCC&k=0&no_gap=0&offset=0&limit=30
0.715 | 0.002 | cgi_end;

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