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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:34:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 13.
CP141922.1:1845112-1845134
CGCTGATTTGGAGCTCTTGATCATAGGCGT1845112GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAGAGTCTAGAGAGAGAAAGT
Malus hybrid cultivar cultivar Flame chromosome 16.
CP141925.1:1924249-1924271
CGCTGACCTGGAGCTCTTGATCATCGGCGT1924249GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAAAGTCTAGAGAGAGAGAGA
Malus hybrid cultivar cultivar Flame chromosome 13.
CP141939.1:1901202-1901224
CGCTGATTTGGAGCTCTTGATCATAGGCGT1901202GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAGAGTCTAGAGAGAGAGAGA
Malus hybrid cultivar cultivar Flame chromosome 16.
CP141942.1:2166240-2166262
CGCTGACTTGGAGCTCTTGATCATCGGCGT2166240GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAAAGTCGAGAGAGAGAGAGA
Malus hybrid cultivar cultivar Royalty chromosome 16.
CP141968.1:2110700-2110722
CGCTGACTTGGAGCTCTTGATCATCGGCGT2110700GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAAAGTCGAGAGAGAGAGAGA
Malus hybrid cultivar cultivar Royalty chromosome 13.
CP141982.1:34741794-34741816
CGCTGATTTGGAGCTCTTGATCATAGGCGT34741794GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAGAGTCTAGAGAGAGAAAGT
Malus hybrid cultivar cultivar Royalty chromosome 16.
CP141985.1:2596113-2596135
CGCTGACTTGGAGCTCTTGATCATCGGCGT2596113GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAAAGTCGAGAGAGAGAGAGA
Malus hybrid cultivar cultivar SH6 chromosome 13.
CP143370.1:1925487-1925509
CGCTGATTTGGAGCTCTTGATCATAGGCGT1925487GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAGAGTCTAGAGAGAGAGAGA
Malus hybrid cultivar cultivar SH6 chromosome 16.
CP143373.1:2186790-2186812
CGCTGACTTGGAGCTCTTGATCATCGGCGT2186790GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAAAGTCTAGAGAGAGAGAGA
Malus hybrid cultivar cultivar SH6 chromosome 13.
CP143387.1:1878001-1878023
CGCTGATTTGGAGCTCTTGATCATAGGCGT1878001GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAGAGTCTAGAGAGAGAAAGA
Malus hybrid cultivar cultivar SH6 chromosome 16.
CP143390.1:1954421-1954443
CGCTGACTTGGAGCTCTTGATCATCGGCGT1954421GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAAAGTCTAGAGAGAGAGAGA
Malus sylvestris genome assembly, chromosome: 13.
OU696515.1:1910095-1910117
CGCTGATTTGGAGCTCTTGATCATAGGCGT1910095GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAGAGTCTAGAGAGAGAAAGT
Malus sylvestris genome assembly, chromosome: 16.
OU696518.1:2134652-2134674
CGCTGACTTGGAGCTCTTGATCATCGGCGT2134652GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAAAGTCGAGAGAGAGAGAGA
Malus domestica genome assembly, chromosome: 13.
OU696689.1:1954801-1954823
CGCTGATTTGGAGCTCTTGATCATAGGCGT1954801GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAGAGTCTAGAGAGAGAAAGT
Malus domestica genome assembly, chromosome: 16.
OU696692.1:2177218-2177240
CGCTGACTTGGAGCTCTTGATCATCGGCGT2177218GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAAAGTCGAGAGAGAGAGAGA
Malus domestica genome assembly, chromosome: 13.
OU744554.1:1959787-1959809
CGCTGATTTGGAGCTCTTGATCATAGGCGT1959787GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAGAGTCTAGAGAGAGAAAGT
Malus domestica genome assembly, chromosome: 16.
OU744557.1:2180361-2180383
CGCTGACTTGGAGCTCTTGATCATCGGCGT2180361GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAAAGTCGAGAGAGAGAGAGA
Malus domestica genome assembly, chromosome: 13.
OU744965.1:1921147-1921169
CGCTGATTTGGAGCTCTTGATCATAGGCGT1921147GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAGAGTCTAGAGAGAGAGAGA
Malus domestica genome assembly, chromosome: 16.
OU744968.1:2176816-2176838
CGCTGACTTGGAGCTCTTGATCATCGGCGT2176816GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAAAGTCGAGAGAGAGAGAGA
Malus domestica genome assembly, chromosome: 13.
OU745003.1:1878210-1878232
CGCTGATTTGGAGCTCTTGATCATAGGCGT1878210GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAGAGTCTAGAGAGAGAAAGT
Malus domestica genome assembly, chromosome: 16.
OU745006.1:2187452-2187474
CGCTGACTTGGAGCTCTTGATCATCGGCGT2187452GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAAAGTCGAGAGAGAGAGAGA
Malus x robusta genome assembly, chromosome: 3.
OY720327.1:2555790-2555812
CGCTGACTTGGAGCTCTTGATCATCGGCGT2555790GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAAAGTCGAGAGAGAGAGAGA
Malus x robusta genome assembly, chromosome: 9.
OY720333.1:1922540-1922562
CGCTGATTTGGAGCTCTTGATCATAGGCGT1922540GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAGAGTCTAGAGAGAGAAAGT
Crataegus laevigata genome assembly, chromosome: 3.
OY756940.1:2046457-2046479
CGCTGATTTGGAGCTCTTGATCATAGGCGT2046457GGCCAAAGTGCATGAGATGTAGTTTCCCATTTGAGAGAGAAAGTAAGAGAGAG
Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH022_05279m, 5' end sequence.
AB450705.1:88-110
TCTCTCTCTCTCTAGACTCTCAAATGGGAA88ACTACATCTCATGCACTTTGGCCACGCCGATGATCAAGAGCTCCAAATCAGCG
Mdfw2003m20.y1 Mdfw Malus domestica cDNA clone Mdfw2003m20 5', mRNA sequence.
CN445562.1:158-180
ACTTTCTCTCTCTAGACTCTCAAATGGGAA158ACTACATCTCATGCACTTTGGCCACGCCTATGATCAAGAGCTCCAAATCAGCG
Mdfw2025e21.y1 Mdfw Malus domestica cDNA clone Mdfw2025e21 5', mRNA sequence.
CN494452.1:82-104
ACTTTCTCTCTCTAGACTCTCAAATGGGAA82ACTACATCTCATGCACTTTGGCCACGCCTATGATCAAGAGCTCCAAATCAGCG
001116AAOA001105HT (AAOA) Royal Gala phloem Malus domestica cDNA clone AAOA001105, mRNA sequence.
CN868500.1:74-96
TCTCTCTCTCTCTCGACTTTCAAATGGGAA74ACTACATCTCATGCACTTTGGCCACGCCGATGATCAAGAGCTCCAAGTCAGCG
001202AAOA005946HT (AAOA) Royal Gala phloem Malus domestica cDNA clone AAOA005946, mRNA sequence.
CN869239.1:61-83
TCTCTCTCTCTCTCGACTTTCAAATGGGAA61ACTACATCTCATGCACTTTGGCCACGCCGATGATCAAGAGCTCCAAGTCAGCG
001202AAOA006077HT (AAOA) Royal Gala phloem Malus domestica cDNA clone AAOA006077, mRNA sequence.
CN869294.1:21-43
CTCGACTTTCAAATGGNGAA21ACTACATCTCATGCACTTTGGCCACGCCGATGATCAAGAGCTCCAAGTCAGCG
001203AAOA004381HT (AAOA) Royal Gala phloem Malus domestica cDNA clone AAOA004381, mRNA sequence.
CN869541.1:51-73
TCTCTGTGTCTCTCGACTTTCAAATGGGAA51ACTACATCTCATGCACTTTGGCCACGCCGATGATCAAGAGCTCCAAGTCAGCG
001203AAOA004610HT (AAOA) Royal Gala phloem Malus domestica cDNA clone AAOA004610, mRNA sequence.
CN869554.1:4-26
GAA4ACTACATCTCATGCACTTTGGCCACGCTCGTGATCAAGAGCTCCACGTCAGCG
001204AAOA007650HT (AAOA) Royal Gala phloem Malus domestica cDNA clone AAOA007650, mRNA sequence.
CN870484.1:72-94
TCTCTCTCTCTCTCGACTTTCAAATGGGAA72ACTACATCTCATGCACTTTGGCCACGCCGATGATCAAGAGCTCCAAGTCAGCG
001204AAOA007747HT (AAOA) Royal Gala phloem Malus domestica cDNA clone AAOA007747, mRNA sequence.
CN870533.1:74-96
TCTCTCTCTCTCTCGACTTTCAAATGGGAA74ACTACATCTCATGCACTTTGGCCACGCCGATGATCAAGAGCTCCAAGTCAGCG
010629AAZA006787HT (AAZA) M9 xylem Malus domestica cDNA clone AAZA006787, mRNA sequence.
CN896748.1:101-123
TACTTTCTCTCTCACACTCTCAAATGGGAA101ACTACATCTCATGCACTTTGGCCACGCCTATGATCAAAAGCTCCAAATCAGCG
010829ABCA001846HT (ABCA) Royal Gala fruit stored at 0.5 degrees C for 24 hours Malus domestica cDNA clone ABCA001846, mRNA sequence.
CN901824.1:63-85
TCTCTCTCTCTCTCGACTTTCAAATGGGAA63ACTACATCTCATGCACTTTGGCCACGCCGATGATCAAGAGCTCCAAGTCAGCG
021014ABCA004674HT (ABCA) Royal Gala fruit stored at 0.5 degrees C for 24 hours Malus domestica cDNA clone ABCA004674, mRNA sequence.
CN902325.1:58-80
TCTCTCTCTCTCTCGACTTTCAAATGGGAA58ACTACATCTCATGCACTTTGGCCACGCCGATGATCAAGAGCTCCAAGTCAGCG
021014ABCA005149HT (ABCA) Royal Gala fruit stored at 0.5 degrees C for 24 hours Malus domestica cDNA clone ABCA005149, mRNA sequence.
CN902514.1:72-94
TCTCTCTCTCTCTCGACTTTCAAATGGGAA72ACTACATCTCATGCACTTTGGCCACGCCGATGATCAAGAGCTCCAAGTCAGCG
021014ABCA006046HT (ABCA) Royal Gala fruit stored at 0.5 degrees C for 24 hours Malus domestica cDNA clone ABCA006046, mRNA sequence.
CN902615.1:78-100
TCTCTCTCTCTCTCGACTTTCAAATGGGAA78ACTACATCTCATGCACTTTGGCCACGCCGATGATCAAGAGCTCCAAGTCAGCG
021015ABCA002800HT (ABCA) Royal Gala fruit stored at 0.5 degrees C for 24 hours Malus domestica cDNA clone ABCA002800, mRNA sequence.
CN902772.1:74-96
TCTCTCTCTCTCTCGACTTTCAAATGGGAA74ACTACATCTCATGCACTTTGGCCACGCCGATGATCAAGAGCTCCAAGTCAGCG
021015ABCA003173HT (ABCA) Royal Gala fruit stored at 0.5 degrees C for 24 hours Malus domestica cDNA clone ABCA003173, mRNA sequence.
CN902935.1:78-100
TCTCTCTCTCTCTCGACTTTCAAATGGGAA78ACTACATCTCATGCACTTTGGCCACGCCGATGATCAAGAGCTCCAAGTCAGCG
021016ABCA003433HT (ABCA) Royal Gala fruit stored at 0.5 degrees C for 24 hours Malus domestica cDNA clone ABCA003433, mRNA sequence.
CN903065.1:64-86
TCTCTCTCTCTCTCGACTTTCAAATGGGAA64ACTACATCTCATGCACTTTGGCCACGCCGATGATCAAGAGCTCCAAGTCAGCG
021016ABCA004387HT (ABCA) Royal Gala fruit stored at 0.5 degrees C for 24 hours Malus domestica cDNA clone ABCA004387, mRNA sequence.
CN903329.1:56-78
TCTCTCTCTCTCTCGACTTTCAAATGGGAA56ACTACATCTCATGCACTTTGGCCACGCCGATGATCAAGAGCTCCAAGTCAGCG
021021ABCA005752HT (ABCA) Royal Gala fruit stored at 0.5 degrees C for 24 hours Malus domestica cDNA clone ABCA005752, mRNA sequence.
CN903774.1:62-84
TCTCTCTCTCTCTCGACTTTCAAATGGGAA62ACTACATCTCATGCACTTTGGCCACGCCGATGATCAAGAGCTCCAAGTCAGCG
021021ABCA005843HT (ABCA) Royal Gala fruit stored at 0.5 degrees C for 24 hours Malus domestica cDNA clone ABCA005843, mRNA sequence.
CN903827.1:71-93
TCTCTCTCTCTCTCGACTTTCAAATGGGAA71ACTACATCTCATGCACTTTGGCCACGCCGATGATCAACAGCTCCAAGTCAGCG
021217ABMA003540HT (ABMA) M9 phloem Malus domestica cDNA clone ABMA003540, mRNA sequence.
CN912314.1:64-86
TCTCTCTCTCTCTCGACTTTCAAATGGGAA64ACTACATCTCATGCACTTTGGCCACGCCGATGATCAAGAGCTCCAAGTCAGCG
021218ABMA004677HT (ABMA) M9 phloem Malus domestica cDNA clone ABMA004677, mRNA sequence.
CN912984.1:67-89
TCTCTCTCTCTCTCGACTTTCAAATGGGAA67ACTACATCTCATGCACTTTGGCCACGCCGATGATCAAGAGCTCCAAGTCAGCG
030203ABPB004055HT (ABPB) M9 root tips Malus domestica cDNA clone ABPB004055, mRNA sequence.
CN916207.1:89-111
ACTTTCTCTCTCTAGACTCTCAAATGGGAA89ACTACATCTCATGCACTTTGGCCACGCCTATGATCAAGAGCTCCAAATCAGCG
030203ABPB003816HT (ABPB) M9 root tips Malus domestica cDNA clone ABPB003816, mRNA sequence.
CN916303.1:56-78
TCTCTCTCTCTCTCGACTTTCAAATGGGAA56ACTACATCTCATGCACTTTGGCCACGCCGATGATCAAGAGCTCCAAGTCAGCG
030203ABPB003598HT (ABPB) M9 root tips Malus domestica cDNA clone ABPB003598, mRNA sequence.
CN917956.1:83-105
ACTTTCTCTCTCTAGACTCTCAAATGGGAA83ACTACATCTCATGCACTTTGGCCACGCCTATGATCAAGAGCTCCAAATCAGCG
TSA: Pyrus pyrifolia mRNA, contig: contig_3071.
FX396239.1:18-40
AGACTCTCAAATGGGAA18ACTACATCTCATGCACTTTGGCCACGCCGATGATCAAGAGCTCCAAATCAGCG
TSA: Pyrus x bretschneideri Unigene48333_XinShao mRNA sequence.
JR638450.1:53-75
ACTTTCTCTCTCTAGACTCTCAAATGGGAA53ACTACATCTCATGCACTTTGGCCACGCCGATGATCAAGAGCTCCAAATCAGCG
Prunus dulcis DNA, pseudomolecule Pd01.
AP019297.1:26448367-26448389
TTTTAATTCGTCACAAGTCTAGAATGGGAA26448367ACTACATCTCATGCACTTTGGCCACGCCTCTGATCAAGAGCTCCAAATCAGCA
Malus hybrid cultivar cultivar Royalty chromosome 13.
CP141965.1:38975364-38975386
ACTTTCTCTCTCTAGACTCTCAAATGGGAA38975364ACTACATCTCATGCACTTTGGCCACGCCTATGATCAAGAGCTCCAAATCAGCG
Pyrus communis genome assembly, chromosome: 6.
OY757073.1:28098489-28098511
TCTCTCTCTCTCTAGACTCTCAAATGGGAA28098489ACTACATCTCATGCACTTTGGCCACGCCTATGATCAAGAGCTCCAAATCAGCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGCCAAAGTGCATGAGATGTAGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCCAAAGTGCATGAGATGTAGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.195 | 0.187 | search_plus_done; http://172.18.8.135:50400/match?q=GGCCAAAGTGCATGAGATGTAGT&k=0&no_gap=0&offset=0&limit=50
1.382 | 1.187 | search_minus_done; http://172.18.8.135:50400/match?q=ACTACATCTCATGCACTTTGGCC&k=0&no_gap=0&offset=0&limit=26
1.403 | 0.021 | cgi_end;

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