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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:44:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-24297 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w32f7 5', mRNA sequence.
DV683712.1:171-198
TGGGAACTTCAAAGGGAGTGTTGGAGATAG171CTAAGTTTGCAGTATATGTGAGTGTCCCGATTGGGCTGATGTACTTCTATGCCAACAA
CGN-26296 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w31f7 5', mRNA sequence.
DV685092.1:171-198
TGGGAACTTCAAAGGGAGTGTTGGAGATAG171CTAAGTTTGCAGTATATGTGAGTGTCCCGATTGGGCTGATGTACTTCTATGCCAACAA
TransId-83953 CACAT36FR28 Coffea arabica cDNA clone CACAT36FR28_Q3_03_J05_074.F similar to Symbol: None | expressed protein | chr4:8383765-8385074 FORWARD | Aliases: None, mRNA sequence.
GR984927.1:209-236
TGGGAACTTCAAAGGGAGTGTTGGAGATAG209CTAAGTTTGCAGTATATGTGAGTGTCCCGATTGGGCTGATGTACTTCTATGCCAACAA
TransId-94526 CACAT36MER Coffea arabica cDNA clone CACAT36MER_Q2_01_G16_247.F similar to Symbol: None | expressed protein | chr4:8383765-8385074 FORWARD | Aliases: None, mRNA sequence.
GR988852.1:215-242
TGGGAACTTCAAAGGGAGTGTTGGAGATAG215CTAAGTTTGCAGTATATGTGAGTGTCCCGATTGGGCTGATGTACTTCTATGCCAACAA
TransId-101833 CACAT45FR Coffea arabica cDNA clone CACAT45FR_M001_D13_196.F similar to Symbol: None | expressed protein | chr4:8383765-8385074 FORWARD | Aliases: None, mRNA sequence.
GR990838.1:215-242
TGGGAACTTCAAAGGGAGTGTTGGAGATAG215CTAAGTTTGCAGTATATGTGAGTGTCCCGATTGGGCTGATGTACTTCTATGCCAACAA
TransId-218151 CACATN1 Coffea arabica cDNA clone CACATN1-5N86TV similar to Hypothetical protein - Arabidopsis thaliana (Mouse-ear cress), mRNA sequence.
GR998043.1:222-249
TGGGAACTTCAAAGGGAGTGTTGGAGATAG222CTAAGTTTGCAGTATATGTGAGTGTCCCGATTGGGCTGATGTACTTCTATGCCAACAA
TransId-256798 CAET87R Coffea arabica cDNA clone CAET87R-CAEU777TV similar to Hypothetical protein - Arabidopsis thaliana (Mouse-ear cress), mRNA sequence.
GT015136.1:161-188
TGGGAACTTCAAAGGGAGTGTTGGAGATAG161CTAAGTTTGCAGTATATGTGAGTGTCCCGATTGGGCTGATGTACTTCTATGCCAACAA
CA00-XX-CL2-001-G06-EZ.F Coffea arabica CL2 Coffea arabica cDNA clone CA00-XX-CL2-001-G06-EZ, mRNA sequence.
GT682464.1:180-207
TGGGAACTTCAAAGGGAGTGTTGGAGATAG180CTAAGTTTGCAGTATATGTGAGTGTCCCGATTGGGCTGATGTACTTCTATGCCAACAA
Coffea arabica clone BAC 136-1N, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces.
GU123899.1:59134-59161
TGGGAACTTCAAAGGGAGTGTTGGAGATAG59134CTAAGTTTGCAGTATATGTGAGTGTCCCGATTGGGCTGATGTACTTCTATGCCAACAA
Coffea canephora isolate HD-200-94 clone BAC CC-62-4K, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
HQ696507.1:136234-136261
TGGGAACTTCAAAGGGAGTGTTGGAGATAG136234CTAAGTTTGCAGTATATGTGAGTGTCCCGATTGGGCTGATGTACTTCTATGCCAACAA
Coffea arabica cultivar iapar59 clone BAC 121-12L, *** SEQUENCING IN PROGRESS ***, 8 ordered pieces.
HQ696510.1:59502-59529
TGGGAACTTCAAAGGGAGTGTTGGAGATAG59502CTAAGTTTGCAGTATATGTGAGTGTCCCGATTGGGCTGATGTACTTCTATGCCAACAA
CCES21 Coffee EST-SSR sequence Coffea canephora STS cDNA, sequence tagged site.
GF110674.1:171-198
TGGGAACTTCAAAGGGAGTGTTGGAGATAG171CTAAGTTTGCAGTATATGTGAGTGTCCCGATTGGGCTGATGTACTTCTATGCCAACAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGGACACTCACATATACTGCAAACTTAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGGACACTCACATATACTGCAAACTTAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.176 | 0.167 | search_plus_done; http://172.18.8.135:50400/match?q=GGGACACTCACATATACTGCAAACTTAG&k=0&no_gap=0&offset=0&limit=50
0.790 | 0.614 | search_minus_done; http://172.18.8.135:50400/match?q=CTAAGTTTGCAGTATATGTGAGTGTCCC&k=0&no_gap=0&offset=0&limit=50
0.798 | 0.008 | cgi_end;

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