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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:16:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Somateria mollissima genome assembly, chromosome: 10.
OX598312.1:17089332-17089353
GAGCCAGGGAACCTCTGTTTAGAGAGCTAT17089332GGGAGAAGTATAAGGAGAAATGAAGTGATGGAAAAAGGGAAAGAATTAAAAG
Somateria mollissima genome assembly, chromosome: 10.
OX598699.1:17122118-17122139
GAGCCAGGGAACCTCTGTTTAGAGAGCTAT17122118GGGAGAAGTATAAGGAGAAATGAAGTGATGGAAAAAGGGAAAGAATTAAAAG
Anas acuta genome assembly, chromosome: 12.
OZ009975.1:17029279-17029300
GAGCCAGGGAACCTCTGTTTAGAGAGCTAT17029279GGGAGAAGTATAAGGAGAAATGAAGTGATGGAAAAAGGGAAAGAATGAAAAG
TSA: Cajanus cajan cultivar UPAS 120 contig07713.UPAS mRNA sequence.
EZ625430.1:69-90
ACCACCTGCTGAGGGTTTGAAGGTGGTGGT69GGGAGAAGTATAAGGAGAAATGTCAAAAGGCTGCAAAGGTGTTGCAGGTGCA
VUH2-79K5TV VUUBBa (VUH2) Vigna unguiculata genomic clone VUH2-79K5, genomic survey sequence.
EI928874.1:63-84
TGAGGGTTTGAAGGTAGAAGAGGTGGTGGT63GGGAGAAGTATAAGGAGAAATGTCAAAAGGCTGCAAAGTCCTTACAGGTGCA
Vigna unguiculata subsp. unguiculata cultivar IT97K-499-35 clone BAC M020I06, *** SEQUENCING IN PROGRESS ***, 31 unordered pieces.
AC274220.1:59895-59916
TGAGGGTTTGAAGGTAGAAGAGGTGGTGGT59895GGGAGAAGTATAAGGAGAAATGTCAAAAGGCTGCAAAGTCCTTACAGGTGCA
Vigna unguiculata cultivar Xiabao 2 chromosome Vu09.
CP039355.1:37482624-37482645
TGAGGGTTTGAAGGTAGAAGAGGTGGTGGT37482624GGGAGAAGTATAAGGAGAAATGTCAAAAGGCTGCAAAGTCCTTACAGGTGCA
Anas platyrhynchos genome assembly, chromosome: 11.
LS423621.1:4914832-4914853
CTTTTCATTCTTTCCCTTTTTCCATCACTT4914832CATTTCTCCTTATACTTCTCCCATAGCTCTCTAAACAGAGGTTCCCTGGCTC
Vigna unguiculata subsp. unguiculata cultivar IT97K-499-35 clone BAC M061G05, *** SEQUENCING IN PROGRESS ***, 11 unordered pieces.
AC272028.1:52230-52251
TGCACCTGTAAGGACTTTGCAGCCTTTTGA52230CATTTCTCCTTATACTTCTCCCACCACCACCTCTTCTACCTTCAAACCCTCA
Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
AP015035.1:16193723-16193744
TGCACCTGTAAGGACTTTGCAGCCTTTTGA16193723CATTTCTCCTTATACTTCTCCCACCACCACCTCTTCTACCTTCAAACTCTCA
Sphenostylis stenocarpa genome assembly, chromosome: 9.
OY731406.1:15474452-15474473
TGCACCTGTAAGAACTTTGCAGCCTTTTGA15474452CATTTCTCCTTATACTTCTCCCACCACCACCTCTTCTACCTTCAACCCCTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGGAGAAGTATAAGGAGAAATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGGAGAAGTATAAGGAGAAATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.344 | 0.335 | search_plus_done; http://172.18.8.135:50400/match?q=GGGAGAAGTATAAGGAGAAATG&k=0&no_gap=0&offset=0&limit=50
0.446 | 0.102 | search_minus_done; http://172.18.8.135:50400/match?q=CATTTCTCCTTATACTTCTCCC&k=0&no_gap=0&offset=0&limit=43
0.451 | 0.005 | cgi_end;

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