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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:40:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KS13064C03 KS13 Capsicum annuum cDNA, mRNA sequence.
GD056714.1:374-399
CCAAAGTCCTTTTAAGCTCAATCTTGGTGT374GGGAGCTTATAGAGATGATAAAGGGAAACCAGTTATTCTTGAGTGTGTTCGAAGAG
KS24052D08 KS24 Capsicum annuum cDNA, mRNA sequence.
GD122701.1:180-205
CCAAAGTCCTTTTAAGCTCAATCTTGGTGT180GGGAGCTTATAGAGATGATAAAGGGAAACCAGTTATTCTTGAGTGTGTTCGAAGAG
TSA: Capsicum annuum MGMT_Contig33584 mRNA sequence.
JW083828.1:525-550
CCAAAGTCCTTTTAAGCTCAATCTTGGTGT525GGGAGCTTATAGAGATGATAAAGGGAAACCAGTTATTCTTGAGTGTGTTCGAAGAG
Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:153970020-153970045
TATTTTATTATTTTCTAAAACTTTTTCATA153970020GGGAGCTTATAGAGATGATAAAGGGAAACCAGTTATTCTTGAGTGTGTTCGAAGAG
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 10.
CP124710.1:105475641-105475666
CTCTTCTAACACACTCAAGAGTAACTGGCT105475641TCCCTTTATCATCTCTATAAGCTCCCTATGAAAAAGTTTTAGAAAAAATAAAATAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:162210498-162210523
CTCTTCGAACACACTCAAGAATAACTGGTT162210498TCCCTTTATCATCTCTATAAGCTCCCTATGAAAAAGTTTTAGAAAATAATAAAATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGGAGCTTATAGAGATGATAAAGGGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGGAGCTTATAGAGATGATAAAGGGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.358 | 0.349 | search_plus_done; http://172.18.8.135:50400/match?q=GGGAGCTTATAGAGATGATAAAGGGA&k=0&no_gap=0&offset=0&limit=50
0.454 | 0.096 | search_minus_done; http://172.18.8.135:50400/match?q=TCCCTTTATCATCTCTATAAGCTCCC&k=0&no_gap=0&offset=0&limit=46
0.455 | 0.001 | cgi_end;

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