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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-25 05:25:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

vsu-ars_007446_LI10Contig_12756 VSU-ARS-L10 Phaseolus acutifolius cDNA, mRNA sequence.
HO782413.1:402-421
GCCGAGGCCCATTTTGGAAGGCTTGGGCTT402GGGATCGTAGGAGGTGGAATAATCAAGCGGAGCGGAAGGCCCACTGGGCC
Vigna angularis mRNA, clone: VES09P22.
HX945856.1:451-470
GCCTAGGCCCATTTTGGAAGGCCTGGGCTT451GGGATCGTAGGAGGTGGAATAATCAAGCGGAGCGGAAGGACCACTGGGCC
Vigna angularis mRNA, clone: VES18C07.
HX948927.1:445-464
GCCTAGGCCCATTTTGGAAGGCCTGGGCTT445GGGATCGTAGGAGGTGGAATAATCAAGCGGAGCGGAAGGACCACTGGGCC
Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
AP015037.1:47665943-47665962
GCCTAGGCCCATTTTGGAAGGCCTGGGCTT47665943GGGATCGTAGGAGGTGGAATAATCAAGCGGAGCGGAAGGACCACTGGGCC
POD_028_C12 Phaseolus vulgaris pod EST library Phaseolus vulgaris cDNA 5', mRNA sequence.
CV540178.1:31-50
GGCCCAGTGGGCCTTCCGCTCCGCTTGATT31ATTCCACCTCCTACGATCCCAAGCCCAAGTCTTCCAAAATGGGCCTAGGC
454PCS0248290 Scarlet Runner Bean globular-stage suspensor region size-fractionated Phaseolus coccineus cDNA, mRNA sequence.
GD620599.1:25-44
GGGCCGTTCCGCTCCGCTTGTATT25ATTCCACCTCCTACGATCCCAAGCCCAAGTCTTCCAAAATGGGCCTAGGC
Vigna angularis mRNA, clone: VEPS02N22.
HX939521.1:746-765
GGCCCAGTGGTCCTTCCGCTCCGCTTGATT746ATTCCACCTCCTACGATCCCAAGCCCAGGCCTTCCAAAATGGGCCTAGGC
Vigna angularis mRNA, clone: VES06H12.
HX944519.1:557-576
GGCCCAGTGGTCCTTCCGCTCCGCTTGATT557ATTCCACCTCCTACGATCCCAAGCCCAGGCCTTCCAAAATGGGCCTAGGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGGATCGTAGGAGGTGGAAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGGATCGTAGGAGGTGGAAT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.746 | 0.738 | search_plus_done; http://172.18.8.135:50400/match?q=GGGATCGTAGGAGGTGGAAT&k=0&no_gap=0&offset=0&limit=50
1.278 | 0.532 | search_minus_done; http://172.18.8.135:50400/match?q=ATTCCACCTCCTACGATCCC&k=0&no_gap=0&offset=0&limit=46
1.281 | 0.003 | cgi_end;

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