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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:44:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

UCRCS09_42H05_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-42H05-P9-1-7.b, mRNA sequence.
CX051926.1:129-148
CGGCACTTTGCATCGAGTGGGAGGAAAATT129GGGATGGACTCCCAGTGTTAACTTCACTGAATGGTCTAGCCATGAATCTT
IC0AAA40AH07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY276100.1:122-141
CGGCACTTTGCATCGAGTGGGAGGAAAATT122GGGATGGACTCCCAGTGTTAACTTCACTGAATGGTCTAGCCATGAATCTT
IC0AAA40AH07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA40AH07, mRNA sequence.
FC898969.1:122-141
CGGCACTTTGCATCGAGTGGGAGGAAAATT122GGGATGGACTCCCAGTGTTAACTTCACTGAATGGTCTAGCCATGAATCTT
UCRCS09_42H05_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-42H05-P9-1-6.g, mRNA sequence.
CX051925.1:586-605
AAGATTCATGGCTAGACCATTCAGTGAAGT586TAACACTGGGAGTCCATCCCAATTTTCCTCCCACTCGATGCAAAGTGCCG
Citrus sinensis genome assembly, chromosome: 9.
OY754326.1:294944-294963
AAGATTCATGGCTAGACCATTCAGTGAAGT294944TAACACTGGGAGTCCATCCCAATTTTCCTCCCACTCGATGCAAAGTGCCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGGATGGACTCCCAGTGTTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGGATGGACTCCCAGTGTTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.354 | 0.346 | search_plus_done; http://172.18.8.135:50400/match?q=GGGATGGACTCCCAGTGTTA&k=0&no_gap=0&offset=0&limit=50
0.520 | 0.165 | search_minus_done; http://172.18.8.135:50400/match?q=TAACACTGGGAGTCCATCCC&k=0&no_gap=0&offset=0&limit=47
0.521 | 0.001 | cgi_end;

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