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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 14:12:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Dianthus caryophyllus mRNA, clone: CES07A11, 5' end sequence.
FY384752.1:425-444
ACGGGTCGACTCGAAATCGATTGCAAAAAT425GGTGGAATTGGGTATGTGGAAGCAAGTAGTGAGTATAAATTGGATGAACT
Dianthus caryophyllus mRNA, clone: CES16D20, 5' end sequence.
FY388242.1:414-433
ACGGGTCGACTCGAAATCGATTGCAAAAAT414GGTGGAATTGGGTATGTGGAAGCAAGTAGTGAGTATAAATTGGATGAACT
Dianthus caryophyllus mRNA, clone: CES19L17, 5' end sequence.
FY389557.1:394-413
ACGGGTCGACTCGAAATCGATTGCAAAAAT394GGTGGAATTGGGTATGTGGAAGCAAGTAGTGAGTATAAATTGGATGAACT
Dianthus caryophyllus mRNA, clone: CES19O03, 5' end sequence.
FY389615.1:422-441
ACGGGTCGACTCGAAATCGATTGCAAAAAT422GGTGGAATTGGGTATGTGGAAGCAAGTAGTGAGTATAAATTGGATGAACT
Dianthus caryophyllus mRNA, clone: CES20_E05, 5' end sequence.
FY389756.1:425-444
ACGGGTCGACTCGAAATCGATTGCAAAAAT425GGTGGAATTGGGTATGTGGAAGCAAGTAGTGAGTATAAATTGGATGAACT
TSA: Dianthus caryophyllus mRNA, contig: CAK09.580.C1.
FX297700.1:424-443
ACGGGTCGACTCGAAATCGATTGCAAAAAT424GGTGGAATTGGGTATGTGGAAGCAAGTAGTGAGTATAAATTGGATGAACT
Papaver somniferum cultivar Roxanne chromosome 5.
CP048217.1:111829600-111829619
GGTTGAATTTATGATAGTTAATGGTTTTGA111829600GGTGGAATTGGGTATGTGGAATAAATATGTGAATTATAGTCTAGCTAGGT
Microcaecilia unicolor genome assembly, chromosome: 9.
LR594640.1:32927927-32927946
TAGTGAGCTTTAGTCATTGGTAACATATGG32927927TCCACATACCCAATTCCACCAGCACAAAGTCGTGCTTTGGACACATTCCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGTGGAATTGGGTATGTGGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTGGAATTGGGTATGTGGA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.627 | 0.618 | search_plus_done; http://172.18.8.135:50400/match?q=GGTGGAATTGGGTATGTGGA&k=0&no_gap=0&offset=0&limit=50
0.742 | 0.115 | search_minus_done; http://172.18.8.135:50400/match?q=TCCACATACCCAATTCCACC&k=0&no_gap=0&offset=0&limit=43
0.743 | 0.001 | cgi_end;

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