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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-09 19:40:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

TSA: Pyrus x bretschneideri Unigene4111_XinShao mRNA sequence.
JR599415.1:641-664
TGTAACCAAATTTGTGAAACACAAGAGAAA641GGTGGATACTCACTCAGTTGGAAAACCCTAAAGAGATATGGAGGAGAGAGAAGA
TSA: Pyrus x bretschneideri Unigene4112_XinShao mRNA sequence.
JR599416.1:733-756
TGTAACCAAATTTGTGAAACACAAGAGAAA733GGTGGATACTCACTCAGTTGGAAAACCCTAAAGAGATATGGAGGAGAGAGAAGA
Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH033_07682m, 5' end sequence.
AB450713.1:146-169
TCTCTCTCTCTCTCTCTCTCTCTGTAGGGT146TTTCCAACTGAGTGAGTATCCACCTTTCTCTTGTGTTTCACAAATTTGGTTACA
Pyrus pyrifolia mRNA, cultivar: Housui, clone: NFR1_14_82m, 5'-end sequence.
AB529444.1:146-169
TCTCTCTCTCTCTCTCTCTCTCTGTAGGGT146TTTCCAACTGAGTGAGTATCCACCTTTCTCTTGTGTTTCACAAATTTGGTTACA
Pyrus pyrifolia mRNA, clone: NFR1_14_82, 5' end sequence, expressed in fruit.
HX746816.1:8-31
GTAGGGT8TTTCCAACTGAGTGAGTATCCACCTTTCTCTTGTGTTTCACAAATTTGGTTACA
TSA: Pyrus pyrifolia mRNA, contig: contig_3719.
FX396473.1:7-30
TAGGGT7TTTCCAACTGAGTGAGTATCCACCTTTCTCTTGTTTTTCACATATTTGGTTACA
Pyrus pyrifolia var. culta PpMADS9-1 mRNA for MADS-box protein, complete cds.
AB623163.2:6-29
AGGGT6TTTCCAACTGAGTGAGTATCCACCTTTCTCTTGTGTTTCACAAATTTGGTTACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGTGGATACTCACTCAGTTGGAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTGGATACTCACTCAGTTGGAAA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.339 | 0.330 | search_plus_done; http://172.18.8.135:50400/match?q=GGTGGATACTCACTCAGTTGGAAA&k=0&no_gap=0&offset=0&limit=50
0.552 | 0.213 | search_minus_done; http://172.18.8.135:50400/match?q=TTTCCAACTGAGTGAGTATCCACC&k=0&no_gap=0&offset=0&limit=48
0.555 | 0.003 | cgi_end;

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