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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-18 12:41:20, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Myotis daubentonii genome assembly, chromosome: 5.
OY725364.1:94461217-94461236
ATCTTTCTATAAAAGAGGTACTTAGAGATG94461217GGTGTCAAGTTGGAAGATGGAAGAGCAGCTGGGGATGTGTGTGTGGGGGA
Myotis nattereri genome assembly, chromosome: 5.
OZ125680.1:92757287-92757306
ATCTTTCTATAATAGAGGTACTTAGAGATG92757287GGTGTCAAGTTGGAAGATGGAAGAGCAGCTGGGGATGTGTGTGGGGGGAG
CBFS3425.fwd CBFS Thalassiosira pseudonana silicate limited cells (-Si) Thalassiosira pseudonana cDNA clone CBFS3425 5', mRNA sequence.
FC512262.1:554-573
GCAGTATTGGACGATGATGGTTCCATTTGT554GGTGTCAAGTTGGAAGATGGGACCACGTTAGAAGCCGATGCATTGGTTGT
CBPB3425.fwd CBPB Thalassiosira pseudonana RNA from carbon dioxide limited cells (-CO2) 8kb Thalassiosira pseudonana cDNA clone CBPB3425 5', mRNA sequence.
FC527242.1:543-562
GCAGTATTGGACGATGATGGTTCCATTTGT543GGTGTCAAGTTGGAAGATGGGACCACGTTAGAAGCCGATGCATTGGTTGT
Vitis vinifera cultivar Black Monukka isolate seedless chromosome 18.
CP141002.1:32211544-32211563
ATGTGCTAAGCTTAAGGGAGTTGTTGGACC32211544GGTGTCAAGTTGGAAGATGGGGAGTGTCTCTAGTGTCAGCTCCAGACTTG
Vitis vinifera cultivar Black Monukka isolate seedless chromosome 18.
CP141021.2:31932743-31932762
ATGTGCTAAGCTTAAGGGAGTTGTTGGACC31932743GGTGTCAAGTTGGAAGATGGGGAGTGTCTCTAGTGTCAGCTCCAAACTTG
Vitis vinifera cultivar Thompson Seedless isolate seedless chromosome 18.
CP142501.2:31710740-31710759
ATGTGCTAAGCTTAAGGGAGTTGTTGGACC31710740GGTGTCAAGTTGGAAGATGGGGAGTGTCTCTAGTGTCAGCTCCAAACTTG
Vitis retordii isolate mmpt chromosome 18.
CP149623.1:32242829-32242848
ATGTCCTAAGCTTAAGGGAGTTGTTAGACC32242829GGTGTCAAGTTGGAAGATGGGGAGTGTCTCTAGTGTCAGCTCTAGACTTG
Vitis vinifera x Vitis labrusca cultivar Shine Muscat chromosome 18.
CP161610.1:31933488-31933507
ATGTGCTAAGCTTAAGGGAGTTGTTGGACC31933488GGTGTCAAGTTGGAAGATGGGGAGTGTCTCTAGTGTCAGCTCCAAACTTG
Vitis vinifera cultivar Manicure Finger chromosome 18.
CP161724.1:32099456-32099475
ATGTGCTAAGCTTAAGGGAGTTGTTGGACC32099456GGTGTCAAGTTGGAAGATGGGGAGTGTCTCTAGTGTCAGCTCCAAACTTG
Vitis vinifera cultivar Hongmunage chromosome 18.
CP161762.1:31829528-31829547
ATGTGCTAAGCTTAAGGGAGTTGTTGGACC31829528GGTGTCAAGTTGGAAGATGGGGAGTGTCTCTAGTGTCAGCTCCAAACTTG
Vitis vinifera cultivar Baimunage chromosome 18.
CP161800.1:31970683-31970702
ATGTGCTAAGCTTAAGGGAGTTGTTGGACC31970683GGTGTCAAGTTGGAAGATGGGGAGTGTCTCTAGTGTCAGCTCCAAACTTG
Vitis pseudoreticulata genome assembly, chromosome: 18.
OZ211515.1:31189208-31189227
ATGTGCTAAGCTTAAGGAAGTTGTTGGACC31189208GGTGTCAAGTTGGAAGATGGGGAGTGTCTCTAGTGTCAGCTCCAGACTTT
Vitis cinerea var. helleri x Vitis vinifera genome assembly, chromosome: 18.
OZ211533.1:31846226-31846245
ATGTGCTAAGCTTAAGGGAGTTGTTGGACC31846226GGTGTCAAGTTGGAAGATGGGGAGTGTCTCTAGTGTCAGCTCCAAACTTG
Thermobia domestica genome assembly, chromosome: 5.
OZ174327.1:183749536-183749555
GTAATTAGAAATTCTTCCTTCAAGCGGCAG183749536GGTGTCAAGTTGGAAGATGGGTGGGTGCCTATGGTTCAGATAAAGTACTT
Scyliorhinus canicula genome assembly, chromosome: 9.
LR744038.1:139442113-139442132
TTTAATTTAAATAATATAAATTAGATAAAG139442113GGTGTCAAGTTGGAAGATGGCATGTGTGCTCTCGATGGGCAAAATATTCT
Myotis emarginatus genome assembly, chromosome: 5.
OZ220652.1:16346374-16346393
TCACACACACACACGTCCCCAGCTGCTCTT16346374CCATCTTCCAACTTGACACCCATCTCTAAGTACCTCTTTTATAGAAAGAT
CBFS3425.rev CBFS Thalassiosira pseudonana silicate limited cells (-Si) Thalassiosira pseudonana cDNA clone CBFS3425 3', mRNA sequence.
FC512261.1:627-646
ACAACCAATGCATCGGCTTCTAACGTGGTC627CCATCTTCCAACTTGACACCACAAATGGAACCATCATCGTCCAATACTGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGTGTCAAGTTGGAAGATGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTGTCAAGTTGGAAGATGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.399 | 0.390 | search_plus_done; http://172.18.8.135:50800/match?q=GGTGTCAAGTTGGAAGATGG&k=0&no_gap=0&offset=0&limit=50
0.593 | 0.194 | search_minus_done; http://172.18.8.135:50800/match?q=CCATCTTCCAACTTGACACC&k=0&no_gap=0&offset=0&limit=34
0.595 | 0.002 | cgi_end;

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