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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 11:54:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:44270476-44270495
AACCACAAATGAAAACTTACAGAGAGTTGT44270476GGTGTTGTGTGCGAAGATTGTAATCTTCTTCTTCTTGCTCACCAATCTCT
Orthosia gothica genome assembly, chromosome: 31.
OX459065.1:15887443-15887462
ATATTATGTTTTATACTTATGTACCAATTT15887443GGTGTTGTGTGCGAAGATTGAAATCGTAATGTCCCCGGTGGGAACAAAAT
Pyrausta purpuralis genome assembly, chromosome: 20.
OZ001662.1:5180364-5180383
AGAGAGATCTTCAATTAGATTGTGCTTCAG5180364GGTGTTGTGTGCGAAGATTGATACGCCACCCCCTCTGGCGGTTTTTCTGT
Arachis hypogaea DNA, clone: AHGS45D04.
DH961618.1:493-512
AGAGATTGGTGAGCAAGAAGAAGAAGATTA493CAATCTTCGCACACAACACCACAACTCTCTGTAAGTTTTCATTTGTGGTT
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:47181674-47181693
GAGAGAAATTGGTGAGCAAGAAGAAGATCA47181674CAATCTTCGCACACAACACCACAACTCTCTGTAAGTTTTCATTTGTGGTT
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:47790789-47790808
GAGAGAAATTGGTGAGCAAGAAGAAGATCA47790789CAATCTTCGCACACAACACCACAACTCTCTGTAAGTTTTCATTTGTGGTT
Pyrausta purpuralis genome assembly, chromosome: 19.
OZ001661.1:23358499-23358518
ACAGAAAAACCGCCAGAGGGGGTGGCGTAT23358499CAATCTTCGCACACAACACCCTGAAGCACAATCTAATTGAAGATCTCTCT
Pyrausta purpuralis genome assembly, chromosome: 30.
OZ001672.1:1049899-1049918
ACAGAAAAACCGCCAGAGGGGGTGGCGTAT1049899CAATCTTCGCACACAACACCCTGAAGCACAATCTAATTGAAGATCTCTCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGTGTTGTGTGCGAAGATTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTGTTGTGTGCGAAGATTG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.154 | 0.145 | search_plus_done; http://172.18.8.135:50400/match?q=GGTGTTGTGTGCGAAGATTG&k=0&no_gap=0&offset=0&limit=50
0.252 | 0.098 | search_minus_done; http://172.18.8.135:50400/match?q=CAATCTTCGCACACAACACC&k=0&no_gap=0&offset=0&limit=47
0.255 | 0.004 | cgi_end;

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