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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:06:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

BR076152 flower cDNA library KFFB Brassica rapa subsp. pekinensis cDNA clone KFFB-067H08 5', mRNA sequence.
EX089862.1:53-72
AGTTAGTTACACAAACTTCTTCCACAAGTC53GTCCGCTTCTTCACCAAAATCTTCACACTCTTTTTCACCTCTACACACAT
Brassica rapa subsp. pekinensis clone KBrH136O12, complete sequence.
FP340390.1:59111-59130
AGTTAGTTACACAAACTTCTTCCACAAGTC59111GTCCGCTTCTTCACCAAAATCTTCACACTCTTTTTCACCTCTACACACAT
Brassica rapa genome, scaffold: A07.
LR031574.1:17605397-17605416
AGTTAGTTACACAAACTTCTTCCACAAGTC17605397GTCCGCTTCTTCACCAAAATCTTCACACTCTTTTTCACCTCTACACACAT
Brassica rapa genome assembly, chromosome: A07.
LS974623.2:17897062-17897081
AGTTAGTTACACAAACTTCTTCCACAAGTC17897062GTCCGCTTCTTCACCAAAATCTTCACACTCTTTTTCACCTCTACACACAT
Alsophila aescularia genome assembly, chromosome: 10.
OX276383.1:22456322-22456341
GGAAACTGTGTTGTGATTATTAAAAACTCC22456322GTCCGCTTCTTCACCAAAATTATTTAACCTCCAACAAAATCTCCACAGTC
Mechanitis mazaeus genome assembly, chromosome: 1.
OY365743.1:12639857-12639876
GGCTGGTGCACTGCGTACTGCTTATCTCCC12639857GTCCGCTTCTTCACCAAAATAACTTAGCACCGTTTCGATACATTCATTTG
Mechanitis messenoides genome assembly, chromosome: 7.
OY365766.1:7073481-7073500
GGCTGGTGCACTGCGTACTGCTTATCTCCC7073481GTCCGCTTCTTCACCAAAATAACTTAGCGCCGTTTCGATACATTCATTTG
Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 99 unordered pieces.
FJ789646.1:808880-808899
ATGTGTGTAGAAGTGGAGAAGAGTGTGAAG808880ATTTTGGTGAAGAAGCGGACGACTTGTGGAAGAAGTTTGTGTAACTAACT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB070L01, complete sequence.
AC189445.2:114554-114573
ATGTGTGTAGAGGTGAAAAAGAGTGTGAAG114554ATTTTGGTGAAGAAGCGGACGACTTGTGGAAGAAGTTTGTGTAACTAACT
Plagodis dolabraria genome assembly, chromosome: 15.
OY978455.1:30199559-30199578
GCGCCGGCGGCGCGCGGCGCCGGCGGTGCC30199559ATTTTGGTGAAGAAGCGGACTATTATATTTTAGTTTGTAAATCTATTATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTCCGCTTCTTCACCAAAAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTCCGCTTCTTCACCAAAAT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.241 | 0.232 | search_plus_done; http://172.18.8.135:50400/match?q=GTCCGCTTCTTCACCAAAAT&k=0&no_gap=0&offset=0&limit=50
0.353 | 0.112 | search_minus_done; http://172.18.8.135:50400/match?q=ATTTTGGTGAAGAAGCGGAC&k=0&no_gap=0&offset=0&limit=43
0.355 | 0.002 | cgi_end;

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