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データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:40:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

MAG: Ralstonia sp. isolate bin465 chromosome.
CP070721.1:9694-9713
GCGCGGGCTGCCGCGCTTCACATAGCCCAG9694GTCGTCGACCGACTTGTAGCCGACCAGCCATGCGTTGTTCGATACCAGCC
Streptomyces rochei 7434AN4 DNA, complete genome.
AP018517.1:4664088-4664107
CCAGGACGCGGTCGGGGTCGTGTGCATGAT4664088GTCGTCGACCGACTTGTAGCCGATCCATCCGACGAACCCCAGGAACGCCA
Ralstonia insidiosa strain ATCC 49129 chromosome 1, complete sequence.
CP016022.1:1820980-1820999
GCGCGGGCTGCCGCGCTTCACATAGCCCAG1820980GTCGTCGACCGACTTGTAGCCGACCAGCCATTCGTTGTTCGACACCATCC
Burkholderia lata strain A05 chromosome 2, complete sequence.
CP024944.1:1550419-1550438
GCGCGGGCTGCCGCGCTTCACGTAGCCCAG1550419GTCGTCGACCGACTTGTAGCCGACGAGCCAGTCGTTGTTCGACACGAGCG
Streptomyces sp. SUK 48 chromosome, complete genome.
CP045740.1:4774196-4774215
CCAGGACGCGGTCGGGGTCGTGTGCACGAT4774196GTCGTCGACCGACTTGTAGCCGATCCACCCGACGAACCCCAGGAACGCCA
Streptomyces griseofuscus strain DSM 40191 chromosome, complete genome.
CP051006.1:4864008-4864027
CCAGGACGCGGTCGGGGTCGTGTGCATGAT4864008GTCGTCGACCGACTTGTAGCCGATCCATCCGACGAACCCCAGGAACGCCA
Streptomyces sp. Z423-1 chromosome.
CP053109.1:5349761-5349780
CCAGGACGCCCTCGGCGTCGTATGGACCAC5349761GTCGTCGACCGACTTGTAGCCGATCCAGCTGACGAAACCGACGAAGGCCA
Streptomyces sp. WP-1 chromosome.
CP123923.1:4591955-4591974
CCAGGACGCGGTCGGGGTCGTGTGCACGAT4591955GTCGTCGACCGACTTGTAGCCGATCCACCCGACGAACCCGAGGAACGCCA
MAG: Elusimicrobia bacterium isolate JAD_PAG50586_1 chromosome, complete genome.
CP096137.1:752296-752315
TCAACGCGACGACGAAGACGCTGTTCAAGC752296GCTACAAGTCGGTCGACGACTACGCCCGCGCGGATCCGGCCGAACTGGAG
Streptomyces sp. endophyte_N2 chromosome, complete genome.
CP028719.1:3823702-3823721
TGGCGTTCCTGGGGTTCGTCGGATGGATCG3823702GCTACAAGTCGGTCGACGACATCGTGCACACGACCCCGACGGCGTCCTGG
Streptomyces murinus strain CR-43 chromosome, complete genome.
CP046623.1:7782258-7782277
TGGCGTTCCTGGGGTTCGTCGGCTGGATCG7782258GCTACAAGTCGGTCGACGACATCGTGCACACGACCCCGACGGCGTCCTGG
Streptomyces broussonetiae strain T44 chromosome.
CP047020.1:4379172-4379191
TGGCGTTCCTGGGCTTCGTGGGCTGGATCG4379172GCTACAAGTCGGTCGACGACATCATCCACACCACCCCGGCCGCGTCCTGG
Streptomyces sp. HF10 chromosome, complete genome.
CP047144.1:3462865-3462884
TGGCGTTCCTCGGGTTCGTCGGGTGGATCG3462865GCTACAAGTCGGTCGACGACATCGTGCACACGACCCCGACCGCGTCCTGG
Streptomyces chromofuscus strain DSM 40273 chromosome, complete genome.
CP063374.1:3571117-3571136
TGGCCTTCGTCGGGTTCGTCGCCTGGATCG3571117GCTACAAGTCGGTCGACGACGTGGTCCACACGACTCCGCGGGCGTCCTGG
Streptomyces murinus strain Am1 chromosome, complete genome.
CP066774.1:8086320-8086339
TGGCGTTCCTGGGGTTCGTCGGATGGATCG8086320GCTACAAGTCGGTCGACGACATCGTGCACACGACCCCGACCGCGTCCTGG
Streptomyces murinus strain NBC_00520 chromosome, complete genome.
CP107838.1:3820873-3820892
TGGCGTTCCTGGGGTTCGTCGGCTGGATCG3820873GCTACAAGTCGGTCGACGACATCGTGCACACGACCCCGACCGCGTCCTGG
Streptomyces murinus strain NBC_01332 chromosome, complete genome.
CP108378.1:3786451-3786470
TGGCGTTCCTGGGGTTCGTCGGCTGGATCG3786451GCTACAAGTCGGTCGACGACATCGTGCACACGACCCCGACGGCGTCCTGG
Streptomyces murinus strain STR-1 chromosome, complete genome.
CP139930.1:3823702-3823721
TGGCGTTCCTGGGGTTCGTCGGATGGATCG3823702GCTACAAGTCGGTCGACGACATCGTGCACACGACCCCGACGGCGTCCTGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTCGTCGACCGACTTGTAGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTCGTCGACCGACTTGTAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.198 | 0.189 | search_plus_done; http://172.18.8.135:50400/match?q=GTCGTCGACCGACTTGTAGC&k=0&no_gap=0&offset=0&limit=50
0.296 | 0.098 | search_minus_done; http://172.18.8.135:50400/match?q=GCTACAAGTCGGTCGACGAC&k=0&no_gap=0&offset=0&limit=42
0.303 | 0.007 | cgi_end;

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