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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:41:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Homo sapiens chromosome 18, clone CTD-2013O15, complete sequence.
AC100777.2:138520-138539
CAACTTTTGGATTTTTATATTAGCATGTTG138520GTCTGCCTCTTCAATTTGTCCACTTCTGTGTCTCACCCTGCAAAGCATCC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH108D17, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC241177.1:64337-64356
AAGACAGCCATCGAGGAGCCGCGTGTCTTG64337GTCTGCCTCTTCAATTTGTCAGTAAGACGAACTAGTAAAATATACTACTA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB045I17, complete sequence.
AC189362.2:42474-42493
AAGACAGCCATCGAGGAGCCGCGTGTCTTG42474GTCTGCCTCTTCAATTTGTCAGTAAGACGAACTAGTAAAATATACTACTA
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:77380-77399
AAGACAGCCATCGAGGAGCCGCGTGTCTTG77380GTCTGCCTCTTCAATTTGTCAGTAAGACGAACTAGTAAAATATACTAGTA
Brassica napus genome assembly, chromosome: A03.
HG994357.1:72226-72245
AAGACAGCCATCGAGGAGCCGCGTGTCTTG72226GTCTGCCTCTTCAATTTGTCAGTAAGACGAACTAGTAAAATATACTAGTA
Brassica rapa genome, scaffold: A03.
LR031572.1:93286-93305
AAGACAGCCATCGAGGAGCCGCGTGTCTTG93286GTCTGCCTCTTCAATTTGTCAGTAAGACGAACTAGTTAAATATACTCCAT
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:93305-93324
AAGACAGCCATCGAGGAGCCGCGTGTCTTG93305GTCTGCCTCTTCAATTTGTCAGTAAGACGAACTAGTTAAATATACTCCAT
Homo sapiens DNA, chromosome 18, nearly complete genome.
AP023478.1:50443981-50444000
GGATGCTTTGCAGGGTGAGACACAGAAGTG50443981GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG
Homo sapiens isolate CHM13 chromosome 18.
CP068260.2:53186653-53186672
GGATGCTTTGCAGGGTGAGACACAGAAGTG53186653GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG
Homo sapiens isolate NA24385 chromosome 18.
CP139525.1:51786662-51786681
GGATGCTTTGCAGGGTGAGACACAGAAGTG51786662GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG
Homo sapiens isolate NA24385 chromosome 18.
CP139548.1:53426075-53426094
GGATGCTTTGCAGGGTGAGACACAGAAGTG53426075GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG
Sequence 714 from Patent WO2004074320.
CQ870293.1:231430-231449
GGATGCTTTGCAGGGTGAGACACAGAAGTG231430GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG
Sequence 78 from Patent WO2006013072.
CS401581.1:601-620
AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT
Sequence 79 from Patent WO2006013072.
CS401582.1:601-620
AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT
Sequence 5 from Patent WO2006089911.
CS409888.1:541-560
AGAGAGTATATTTAACTAGTTCGTCTTACT541GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCCTCGATGGCTGTCT
Sequence 6 from Patent WO2006089911.
CS409889.1:279-298
AGAGAGTATATTTAACTAGTTCGTCTTACT279GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT
JP 2009520459-A/436: THERAPEUTIC TARGETS IN CANCER.
DM209897.1:231430-231449
GGATGCTTTGCAGGGTGAGACACAGAAGTG231430GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG
Sequence 1241 from patent US 8216786.
GZ368962.1:652534-652553
GGATGCTTTGCAGGGTGAGACACAGAAGTG652534GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG
Sequence 78 from Patent EP2163635.
HC471042.1:601-620
AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT
Sequence 79 from Patent EP2163635.
HC471043.1:601-620
AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT
Sequence 78 from Patent EP2166103.
HC476902.1:601-620
AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT
Sequence 79 from Patent EP2166103.
HC476903.1:601-620
AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT
Sequence 78 from Patent EP2166104.
HC477707.1:601-620
AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT
Sequence 79 from Patent EP2166104.
HC477708.1:601-620
AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT
Sequence 78 from patent US 8465915.
HJ230574.1:601-620
AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT
Sequence 79 from patent US 8465915.
HJ230575.1:601-620
AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT
Sequence 78 from patent US 9133466.
HL197148.1:601-620
AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT
Sequence 79 from patent US 9133466.
HL197149.1:601-620
AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT
KR 1020190033687-A/6: Mutant Genes as Diagnosis Marker for Endometriosis and and the uses thereof.
LY649067.1:643150-643169
GGATGCTTTGCAGGGTGAGACACAGAAGTG643150GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG
Sequence 888 from patent US 10233495.
MM797831.1:643150-643169
GGATGCTTTGCAGGGTGAGACACAGAAGTG643150GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG
Sequence 1241 from patent US 10584384.
MO941386.1:652534-652553
GGATGCTTTGCAGGGTGAGACACAGAAGTG652534GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG
Sequence 2007 from patent US 10724096.
MV449107.1:643151-643170
GGATGCTTTGCAGGGTGAGACACAGAAGTG643151GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG
Sequence 387 from patent US 11180807.
MY728208.1:643151-643170
GGATGCTTTGCAGGGTGAGACACAGAAGTG643151GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG
Sequence 1241 from patent US 11408034.
OO445332.1:652534-652553
GGATGCTTTGCAGGGTGAGACACAGAAGTG652534GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG
Sequence 2007 from patent US 11549145.
OS137907.1:643151-643170
GGATGCTTTGCAGGGTGAGACACAGAAGTG643151GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG
Eukaryotic synthetic construct chromosome 18.
CP034496.1:50499691-50499710
GGATGCTTTGCAGGGTGAGACACAGAAGTG50499691GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG
Eukaryotic synthetic construct chromosome 18.
CP034521.1:50499691-50499710
GGATGCTTTGCAGGGTGAGACACAGAAGTG50499691GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTCTGCCTCTTCAATTTGTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTCTGCCTCTTCAATTTGTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.172 | 0.163 | search_plus_done; http://172.18.8.135:50400/match?q=GTCTGCCTCTTCAATTTGTC&k=0&no_gap=0&offset=0&limit=50
0.918 | 0.746 | search_minus_done; http://172.18.8.135:50400/match?q=GACAAATTGAAGAGGCAGAC&k=0&no_gap=0&offset=0&limit=43
0.937 | 0.019 | cgi_end;

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