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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 18:54:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Rana temporaria genome assembly, chromosome: 4.
LR991683.1:23860288-23860307
TATTCACCTTGGATCTCATTAATATCACTT23860288GTTTCATCGCCCTCATCATTGGCGTTGATGTCAGGTGGGACAAGAAATTA
Solanum melongena mRNA, clone: PLA05E17, 5'end, expressed in mixture of placenta and immature seed at 10d after anthesis.
FS045375.1:192-211
ACCACCACCAAGAACAACAAAACGTTACTT192GTTTCATCGCCCTCATCATTGTTCCCACCACCAAAGAATTCCTAAAAGAA
Sarcophaga subvicina genome assembly, chromosome: 2.
OW388081.2:115437465-115437484
AAAAAAATATCGATTCTTACTTACCTCGTC115437465GTTTCATCGCCCTCATCATTCCAGCCGATTTTCTCGATGACTGTTGACAA
Solanum melongena mRNA, clone: PLA05E17, 3'end, expressed in mixture of placenta and immature seed at 10d after anthesis.
FS045376.1:461-480
TTCTTTTAGGAATTCTTTGGTGGTGGGAAC461AATGATGAGGGCGATGAAACAAGTAACGTTTTGTTGTTCTTGGTGGTGG
Sarcophaga variegata genome assembly, chromosome: 2.
OW026359.1:100806982-100807001
TTGTCAACAGTCATCGAGAAAATCGGCTGG100806982AATGATGAGGGCGATGAAACGATGAGGTAAGTAAGAATCGATATTTTTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTTTCATCGCCCTCATCATT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTTTCATCGCCCTCATCATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.412 | 0.403 | search_plus_done; http://172.18.8.135:50400/match?q=GTTTCATCGCCCTCATCATT&k=0&no_gap=0&offset=0&limit=50
0.579 | 0.167 | search_minus_done; http://172.18.8.135:50400/match?q=AATGATGAGGGCGATGAAAC&k=0&no_gap=0&offset=0&limit=47
0.580 | 0.001 | cgi_end;

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