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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:23:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Phalacrocorax carbo genome assembly, chromosome: 3.
OY997603.1:120963724-120963743
TGAGTGATCCAGGGAGCTTTTCCTGTAAAA120963724TAAGCTGCATTTAACCCTTTCATTGGCAGAGAGCTTTCTCCTCTAATAGT
Tridacna gigas genome assembly, chromosome: 17.
OX244044.2:43111542-43111561
CAAAATTTTCATCCTGATCTTTGATCTACA43111542TAAGCTGCATTTAACCCTTTACCACACAATCCCATGTTTTAACGACCCTG
Antitype chi genome assembly, chromosome: 6.
OX375813.1:18941373-18941392
TGTCAAGATTTGGCATAAACCTGTGGTTCC18941373TAAGCTGCATTTAACCCTTTCGATTCCACCTACTTTTCATAGAGCACTTA
Acholoe squamosa genome assembly, chromosome: 7.
OX439041.1:38216851-38216870
TAAATGCTCTGTTTACGCCACACTCATCTG38216851TAAGCTGCATTTAACCCTTTTAAGATAAGGCTACGGTTTGAATATTGTCC
Azorinus chamasolen genome assembly, chromosome: 18.
OY755252.1:46622695-46622714
ATGTTCCAGCTGAGAGAAGTACATCCTGTC46622695TAAGCTGCATTTAACCCTTTCCCTCATATAAATGTCTTTTCACACATAAT
Allygus modestus genome assembly, chromosome: 6.
OY776117.1:99744802-99744821
AAATGAAATTTTTAAATTGTATCCTAAATT99744802TAAGCTGCATTTAACCCTTTTACTGCCGACGTGCGCATTTGCGCACGTCG
Thunnus maccoyii genome assembly, chromosome: 21.
OU343211.1:7592117-7592136
GCAGAGTTGAAGAGAAGATTTATGTAAAAG7592117AAAGGGTTAAATGCAGCTTAATATCTTATTATATTTGTTGACTGTCGAGA
Thunnus albacares genome assembly, chromosome: 21.
OU607612.1:8022956-8022975
GCAGAGTTGAAGAGAAGATTTATGTAAAAG8022956AAAGGGTTAAATGCAGCTTAATATCTTGTTATATTTGTTGACTGTCAAGA
Phalacrocorax aristotelis genome assembly, chromosome: 3.
OX451224.1:8825062-8825081
ACTATTAGAGGAGAAAGCTCTCTGCCAATG8825062AAAGGGTTAAATGCAGCTTATTTTACAGGAAAAGCTCCCTGGATCACTCA
QM0AAA4CH05RM1 CCL1 Citrus clementina genomic clone CCL021P09, genomic survey sequence.
ET070875.1:673-692
CTGAATGGCGGAAAAGACCCAACCAAAAAA673AAAGGGTTAAATGCAGCTTACTGTGTAGT
Citrus sinensis genome assembly, chromosome: 7.
OY754324.1:29660241-29660260
CTGAATGGCGGAAAAGACCCAACCAAAAAA29660241AAAGGGTTAAATGCAGCTTACTGTGTAGTTCTTCATCCTTTGGAAAATAG
Azorinus chamasolen genome assembly, chromosome: 9.
OY755243.1:36203014-36203033
TTATTATTTTAACATGAATATTTATGAGCT36203014AAAGGGTTAAATGCAGCTTATCAGTATATTGCATGCTCTATATCCCATTC
Fragum sueziense genome assembly, chromosome: 2.
OY804593.1:42367234-42367253
TTGGACCACTCTAAATGTTGCCCGTTTGGT42367234AAAGGGTTAAATGCAGCTTAAAGAGACACCAATTTCTCATGTTATGTTAA
Fragum sueziense genome assembly, chromosome: 8.
OY804599.1:14195112-14195131
AAGAGACGTCAAAACCAGGTCTTGTTTGGG14195112AAAGGGTTAAATGCAGCTTAATTGTGCAGTTGCATTTAGCTTTCAATTAC
Fragum sueziense genome assembly, chromosome: 10.
OY804601.1:12247086-12247105
AAACACGTCCGAAAAAAATATTTGGCAGTG12247086AAAGGGTTAAATGCAGCTTAAAACAAGCAGCAGTTACGAGGTTTTTGTAA
Ostrinia nubilalis genome assembly, chromosome: 22.
OY979756.1:6812201-6812220
ATCAGTTAAAATATATTTTCTACACCAGTG6812201AAAGGGTTAAATGCAGCTTAAGCGAAGACAAAGCCCAACCGTTTCCTTCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TAAGCTGCATTTAACCCTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TAAGCTGCATTTAACCCTTT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.168 | 0.160 | search_plus_done; http://172.18.8.135:50400/match?q=TAAGCTGCATTTAACCCTTT&k=0&no_gap=0&offset=0&limit=50
0.300 | 0.132 | search_minus_done; http://172.18.8.135:50400/match?q=AAAGGGTTAAATGCAGCTTA&k=0&no_gap=0&offset=0&limit=44
0.307 | 0.007 | cgi_end;

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