GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2026-03-05 04:27:44, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

EG-A11_008_D11 Oil palm abnormal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN600203.1:128-146
ACGCGGAGCAGGCGAGCATGTGGAGCGTCG128TAAGGAAAATGGGGTATCGGTAGCCGTAGATGCTGAGGAGGTATTTGTT
Humulus lupulus genome assembly, chromosome: 4.
OY720651.1:107003930-107003948
AGCAGGCAACATCGCTTCATATCCATATGT107003930TAAGGAAAATGGGGTATCGTCGGTTGCTATTTGATGTGTTGTTTTATAC
Cornus suecica genome assembly, chromosome: 7.
OY998244.1:49993422-49993440
ATGGGTCGGGTACCCTAGCCAGGCAACAAA49993422TAAGGAAAATGGGGTATCGGTGAAGAACCCATTGGTGTGGGAGCTTGGC
Adonis annua genome assembly, chromosome: 12.
OZ123187.1:634454657-634454675
AAATAGCACAAGAGATCATATGAAGCATTG634454657TAAGGAAAATGGGGTATCGATAACCATAGAAACTAAGGAGATACTTGTT
Ribes rubrum genome assembly, chromosome: 2.
OZ237952.1:53349980-53349998
CAACGGGATCACTGCCTCTATGCCTTAGGC53349980TAAGGAAAATGGGGTATCGCCGGTCGAATTCCTTAGTGTTGTTCGGTAC
Ribes rubrum genome assembly, chromosome: 5.
OZ237955.1:56393048-56393066
CAACGGGATCACCACCTCCATGCCGTAGGC56393048TAAGGAAAATGGGGTATCGCCGGTTGAATTTCTCGGTGTGGTTCGGTAC
Primula hirsuta genome assembly, chromosome: 24.
OZ272443.1:5557060-5557078
TGGGTACGATACGGCGGTACGCATATCCGT5557060TAAGGAAAATGGGGTATCGTTGATTTTTCTGGGTTAAGACCGCTTGGGT
Ribes nigrum genome assembly, chromosome: 1.
OZ306279.1:34261797-34261815
CAATGGGATCACTGCCTCCATGCCATAAGC34261797TAAGGAAAATGGGGTATCGCTAGTTGACTTCCTCGGTGTGGTTGGGTAC
Hydra vulgaris strain AEPx105 chromosome 12.
CP147934.1:43957532-43957550
TCATCTTTCAGAAAAGGCTTTAGATTACTT43957532TAAGGAAAATGGGGTATCGGTTTGTTCATTTCCTCCTCATTGCAGCCAT
Dinocampus coccinellae genome assembly, chromosome: 6.
OY987189.1:9161760-9161778
CTTTGGAACAATTCATAATTTATATATAAA9161760TAAGGAAAATGGGGTATCGGTCATCTGTGAAGATGAAAACTTTTTCGTC
Heliconius congener genome assembly, chromosome: 6.
OZ070828.1:13016796-13016814
AGAAAAAAAGTACGAAGCAAGAGAGAGTGA13016796TAAGGAAAATGGGGTATCGTACTCGGCTTACTTTCGAAAACACAGTATC
Heliconius congener genome assembly, chromosome: 6.
OZ071069.1:12571486-12571504
AGAAAAAAAGTACGAAGCAAGAGAGAGTGA12571486TAAGGAAAATGGGGTATCGTACTCGGCTTACTTTCGAAAACACAGTATC
Elaeis guineensis EST, clone (6lib)_isotig30464.
LM624928.1:231-249
AACAAATACCTCCTCAGCATCTACGGCTAC231CGATACCCCATTTTCCTTACGACGCTCCACATGCTCGCCTGCTCCGCGT
Humulus lupulus 10-12 DNA, chromosome 3, nearly complete sequence.
AP031504.1:143176114-143176132
GTATAAAACAACACATCAAATAGCAACCGA143176114CGATACCCCATTTTCCTTAACATATGGATATGAAGCGATGTTGCCTGCT
Humulus lupulus Saaz DNA, chromosome 3, nearly complete sequence.
AP031524.1:143777603-143777621
GTATAAAACAACACATCAAATAGCAACCGA143777603CGATACCCCATTTTCCTTAACATATGGATATGAAGCGATGTTGCCTGCT
Humulus lupulus Saaz DNA, chromosome 3, nearly complete sequence.
AP031534.1:144807880-144807898
GTATAAAACAACACATCAAATAGCAACCGA144807880CGATACCCCATTTTCCTTAACATATGGATATGAAGCGATGTTGCCTGCT
Humulus lupulus Saaz DNA, chromosome 3, nearly complete sequence.
AP031544.1:142284030-142284048
GTATAAAACAACACATCAAATAGCAACCGA142284030CGATACCCCATTTTCCTTAACATATGGATATGAAGCGATGTTGCCTGCT
Humulus lupulus 10-12 DNA, chromosome 3, nearly complete sequence.
AP031554.1:143176114-143176132
GTATAAAACAACACATCAAATAGCAACCGA143176114CGATACCCCATTTTCCTTAACATATGGATATGAAGCGATGTTGCCTGCT
Ulmus glabra genome assembly, chromosome: 13.
OZ067195.1:18614546-18614564
AGATCATAATTGGTAAGAGGAAATTACAAC18614546CGATACCCCATTTTCCTTAACCTATTATATTTGCGCACCCTTTTAAAAA
Ribes rubrum genome assembly, chromosome: 4.
OZ237954.1:79821223-79821241
GTACCGAACCACACCGAGGAAGTCAACTGG79821223CGATACCCCATTTTCCTTAGCATACGGCATGGAGGCAGTAATCCCGCTG
Loboptera decipiens genome assembly, chromosome: 12.
OZ212024.1:56474782-56474800
GCCGTTAAACTGGTTTTCTATACCGGATTT56474782CGATACCCCATTTTCCTTACGATGCTGGATGGGCACAGGTCCCATACAC
Macrodema micropterum genome assembly, chromosome: 3.
OZ281134.1:116094005-116094023
AGCACAGCTTCATTTCGGTAAACAAATCGT116094005CGATACCCCATTTTCCTTACTCTTTGTTATTGTTGCTATTTTAATACAG
Rhyzobius forestieri genome assembly, chromosome: 8.
OZ306179.1:24620311-24620329
CTGCATGCCTGATGACCAGATCACAAAACT24620311CGATACCCCATTTTCCTTATTTCTCTCCATGACTCGACTTTCCAGCATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TAAGGAAAATGGGGTATCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TAAGGAAAATGGGGTATCG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.273 | 0.264 | search_plus_done; http://172.18.8.135:50900/match?q=TAAGGAAAATGGGGTATCG&k=0&no_gap=0&offset=0&limit=50
0.536 | 0.263 | search_minus_done; http://172.18.8.135:50900/match?q=CGATACCCCATTTTCCTTA&k=0&no_gap=0&offset=0&limit=38
0.543 | 0.008 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).