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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 20:40:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

EG-A11_008_D11 Oil palm abnormal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN600203.1:128-146
ACGCGGAGCAGGCGAGCATGTGGAGCGTCG128TAAGGAAAATGGGGTATCGGTAGCCGTAGATGCTGAGGAGGTATTTGTT
Humulus lupulus genome assembly, chromosome: 4.
OY720651.1:107003930-107003948
AGCAGGCAACATCGCTTCATATCCATATGT107003930TAAGGAAAATGGGGTATCGTCGGTTGCTATTTGATGTGTTGTTTTATAC
Cornus suecica genome assembly, chromosome: 7.
OY998244.1:49993422-49993440
ATGGGTCGGGTACCCTAGCCAGGCAACAAA49993422TAAGGAAAATGGGGTATCGGTGAAGAACCCATTGGTGTGGGAGCTTGGC
Dinocampus coccinellae genome assembly, chromosome: 6.
OY987189.1:9161760-9161778
CTTTGGAACAATTCATAATTTATATATAAA9161760TAAGGAAAATGGGGTATCGGTCATCTGTGAAGATGAAAACTTTTTCGTC
Elaeis guineensis EST, clone (6lib)_isotig30464.
LM624928.1:231-249
AACAAATACCTCCTCAGCATCTACGGCTAC231CGATACCCCATTTTCCTTACGACGCTCCACATGCTCGCCTGCTCCGCGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TAAGGAAAATGGGGTATCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TAAGGAAAATGGGGTATCG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.362 | 0.353 | search_plus_done; http://172.18.8.135:50400/match?q=TAAGGAAAATGGGGTATCG&k=0&no_gap=0&offset=0&limit=50
0.554 | 0.192 | search_minus_done; http://172.18.8.135:50400/match?q=CGATACCCCATTTTCCTTA&k=0&no_gap=0&offset=0&limit=46
0.555 | 0.001 | cgi_end;

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