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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 11:39:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

UCRCS11_03H17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0003H17, mRNA sequence.
DN619107.1:319-338
CACCAATAAAAGCACCAACGACCAATCACA319TACCTCCACGTGTCAAACCATCACCCGTTCCCAGCCCCGGTCCCGGCCGT
IC0AAA42BG06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY276912.1:284-303
CACCAATAAAAGCACCAACGACCAATCACA284TACCTCCACGTGTCAAACCATCACCCGTTCCCAGCCCCGGTCCCGGCCGT
IC0AAA42BG06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA42BG06, mRNA sequence.
FC912428.1:284-303
CACCAATAAAAGCACCAACGACCAATCACA284TACCTCCACGTGTCAAACCATCACCCGTTCCCAGCCCCGGTCCCGGCCGT
Citrus sinensis genome assembly, chromosome: 1.
OY754318.1:18459618-18459637
ACGGCCGGGACCGGGGCTGGGAACGGGTGA18459618TGGTTTGACACGTGGAGGTATGTGATTGGTCGTTGGTGCTTTTATTGGTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TACCTCCACGTGTCAAACCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TACCTCCACGTGTCAAACCA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.323 | 0.314 | search_plus_done; http://172.18.8.135:50400/match?q=TACCTCCACGTGTCAAACCA&k=0&no_gap=0&offset=0&limit=50
0.393 | 0.071 | search_minus_done; http://172.18.8.135:50400/match?q=TGGTTTGACACGTGGAGGTA&k=0&no_gap=0&offset=0&limit=47
0.394 | 0.001 | cgi_end;

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