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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 05:14:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pinus sylvestris EST, clone WZ0APSBA1YP08NM1.
HE628441.1:19-38
GCAGTTCGATAAATTAAC19TATAGATAAACGGGAAATGAACACAAACGGTTACTATAGTTAACTTGTAG
Pinus sylvestris EST, clone WZ0APSBA5YD16NM1.
HE630035.1:7-26
ATTAAC7TATAGATAAACGGGAAATGAACACAAACGGTTACTATAGTTAACTTGTAG
Pinus sylvestris EST, clone WZ0APSBC7YB12NM1.
HE639355.1:7-26
ATTAAG7TATAGATAAACGGGAAATGAACACAAACGGTTACTATAGTTAACTTGTAG
Nephrotoma appendiculata genome assembly, chromosome: 2.
OX371224.1:116653515-116653534
TTCCTCTTTACCTATAAAATAAATAAATTT116653515TATAGATAAACGGGAAATGAAAAGTTGCCGGATACAAGTTACTCTAGTGT
Tenebrio molitor genome assembly, chromosome: 1.
OZ014538.1:4903341-4903360
GAAAGACGGTGAAAATAGGATACAGGAAGA4903341TATAGATAAACGGGAAATGATTTATATGGATAAAAGAGAAAAGAAACTGA
Pinus sylvestris EST, clone WZ0APSBC7YB12FM1.
HE639354.1:405-424
CTACAAGTTAACTATAGTAACCGTTTGTGT405TCATTTCCCGTTTATCTATACTTAATTTATCGAACTGCGTGAGTAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TATAGATAAACGGGAAATGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TATAGATAAACGGGAAATGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.699 | 0.691 | search_plus_done; http://172.18.8.135:50400/match?q=TATAGATAAACGGGAAATGA&k=0&no_gap=0&offset=0&limit=50
0.904 | 0.205 | search_minus_done; http://172.18.8.135:50400/match?q=TCATTTCCCGTTTATCTATA&k=0&no_gap=0&offset=0&limit=45
0.905 | 0.001 | cgi_end;

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