GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-02-15 06:06:34, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Prunus dulcis DNA, pseudomolecule Pd02.
AP019298.1:439204-439222
TATTACACAGCTAGTTAAGCAGATCCTCCC439204TCACTCTCCGCTGCCACTTCTACTGTTAACCAAAGTTTCTATGGAGACA
Prunus speciosa IZO01 DNA, chromosome 2, sequence.
AP029590.1:550583-550601
TATTACGCAGCTAGTTATGCTGATCCTCCC550583TCACTCTCCGCTGCCACTTCTACTGTTAACCGAAGTTTCTTTGGAGACA
Prunus speciosa IZO01 DNA, chromosome 2, sequence.
AP029590.1:570483-570501
TATTACACAGCTAGTTATGCAGATCCTCCC570483TCACTCTCCGCTGCCACTTCCACTGTTAACCAAAGTTTCTATGGAGACA
Prunus speciosa IZO01 DNA, chromosome 2.
AP038356.1:553506-553524
TATTACGCAGCTAGTTATGCTGATCCTCCC553506TCACTCTCCGCTGCCACTTCTACTGTTAACCAAAGTTTCTTTGGAGACA
Prunus speciosa IZO01 DNA, chromosome 2.
AP038356.1:573374-573392
TATTACACAGCTAGTTATGCAGATCCTCCC573374TCACTCTCCGCTGCCACTTCCACTGTTAACCAAAGTTTCTATGGAGACA
Prunus speciosa IZO01 DNA, chromosome 2.
AP038364.1:550583-550601
TATTACGCAGCTAGTTATGCTGATCCTCCC550583TCACTCTCCGCTGCCACTTCTACTGTTAACCGAAGTTTCTTTGGAGACA
Prunus speciosa IZO01 DNA, chromosome 2.
AP038364.1:570483-570501
TATTACACAGCTAGTTATGCAGATCCTCCC570483TCACTCTCCGCTGCCACTTCCACTGTTAACCAAAGTTTCTATGGAGACA
Prunus dulcis genome assembly, chromosome: 2.
OZ022198.1:588391-588409
TATTACACAGCTAGTTATGCAGATCCTCCC588391TCACTCTCCGCTGCCACTTCTACTGTTAACCAAAGTTTCTATGGAGACA
Prunus dulcis genome assembly, chromosome: 2.
OZ022207.1:553899-553917
TATTACACAGCTAGTTATGCAGATCCTCCC553899TCACTCTCCGCTGCCACTTCTACTGTTAACCAAAGTTTCTATGGAGACA
Prunus armeniaca genome assembly, chromosome: 2.
OZ046361.2:573292-573310
TATTACACAGCTAGTTATGCAGATCCTCCC573292TCACTCTCCGCTGCCACTTCTACTGTTAACCAAAGTTTCTATGGAGACA
Prunus padus genome assembly, chromosome: 7.
OZ060517.1:457214-457232
TATTACACAAGTAGTTATGCAGATCCTCCC457214TCACTCTCCGCTGCCACTTCTACTGTTAACCAAAGTTTCTATGGAGACA
Rosa spinosissima genome assembly, chromosome: 8.
OZ218473.1:3673501-3673519
CCTAATGTTTCTCAACACTAATTCATACTT3673501TCACTCTCCGCTGCCACTTGAACAAAGCTAAAGAACTTTTCTAAAATTG
Myotis mystacinus genome assembly, chromosome: 3.
OZ065555.2:161656373-161656391
AAGGCACTCACTGCCTCTGAATGGCAGCAG161656373AAGTGGCAGCGGAGAGTGATCAGAGCCCTGTTGTTTGGCACAGAACACT
Myotis mystacinus genome assembly, chromosome: 3.
OZ077853.1:161968453-161968471
AAGGCACTCACTGCCTCTGAATGGCAGCAG161968453AAGTGGCAGCGGAGAGTGATCAGAGCCCTGTTGTTTGGCACAGAACACT
TSA: Phyllium philippinicum contig00866.Phphadfe mRNA sequence.
JR894405.1:573-591
TGGAGGAGATAGAAGATCTTCGTAAGAGAA573AAGTGGCAGCGGAGAGTGAGTACCGCAACTCAATGCCTGCGAGCAGTTA
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:35310038-35310056
GGAGCAATAAGAAAAGGTGACGTGAGTTAG35310038AAGTGGCAGCGGAGAGTGAGATCGAGATCAAGGTGAGAGAGATCGTTAG
Arachis hypogaea cultivar Yunnan Rainbow Peanut chromosome 01.
CP156088.1:35488190-35488208
GGAGCAATAAGAAAAGGTGACGTGAGTTAG35488190AAGTGGCAGCGGAGAGTGAGATCGAGATCAAGGTGAGAGAGATCGTTAG
Arachis hypogaea cultivar Huayu23 chromosome 01.
CP156108.1:35535835-35535853
GGAGCAATAAGAAAAGGTGACGTGAGTTAG35535835AAGTGGCAGCGGAGAGTGAGATCGAGATCAAGGTGAGAGAGATCGTTAG
Arachis hypogaea cultivar Chedouzi chromosome 01.
CP156128.1:35548494-35548512
GGAGCAATAAGAAAAGGTGACGTGAGTTAG35548494AAGTGGCAGCGGAGAGTGAGATCGAGATCAAGGTGAGAGAGATCGTTAG
Arachis hypogaea cultivar Laiyang Silihong chromosome 01.
CP156148.1:33549731-33549749
GGAGCAATAAGAAAAGGTGACGTGAGTTAG33549731AAGTGGCAGCGGAGAGTGAGATCGAGATCAAGGTGAGAGAGATCGTTAG
Prunus brigantina genome assembly, chromosome: 2.
OZ184543.1:590093-590111
TGTCTCCATAGAAACTTTGGTTAACAGTAG590093AAGTGGCAGCGGAGAGTGAGGGAGGATCTGCATAACTAGCTGTGTAATA
Ancylis achatana genome assembly, chromosome: 4.
OZ172865.1:13770066-13770084
AATGACAAGATAAAGCATCTGTCACTTGAC13770066AAGTGGCAGCGGAGAGTGACAGGTGCTTGATTCTGTCATTATCACGCGA
Naticarius hebraeus genome assembly, chromosome: 2.
OZ204913.1:90475510-90475528
AAACCTGACAGTGACACAAGCTCAAGGACA90475510AAGTGGCAGCGGAGAGTGAAAACAGCCCGGAGGGGGAGAATTACAGCGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCACTCTCCGCTGCCACTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCACTCTCCGCTGCCACTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.111 | 0.102 | search_plus_done; http://172.18.8.135:50800/match?q=TCACTCTCCGCTGCCACTT&k=0&no_gap=0&offset=0&limit=50
0.168 | 0.057 | search_minus_done; http://172.18.8.135:50800/match?q=AAGTGGCAGCGGAGAGTGA&k=0&no_gap=0&offset=0&limit=38
0.176 | 0.007 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).