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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:58:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Trifolium dubium genome assembly, chromosome: 14.
OX638075.1:552268-552286
GAACCGGCATGATCTTCATCACTTCGTCTT552268TCAGAGTTGGACCGACGAGAGTGTCGATGATTTGGTGCTCCTTGATTGG
Trifolium fragiferum genome assembly, chromosome: 2.
OX940790.1:770126-770144
GAACCGGCATGATTTTCATCACTTCGTCTT770126TCAGAGTTGGACCGACGAGTGTGTCGATGATTTGATGCTCCTTGATTGG
Astragalus glycyphyllos genome assembly, chromosome: 4.
OY754310.1:69253701-69253719
GAACCGGCATGATTTTCATCACTTCGTCTT69253701TCAGAGTTGGACCGACGAGTGTGTCAATGATCTGATGCTCCTTGATGGG
Sparus aurata genome assembly, chromosome: 3.
LR537123.1:25776098-25776116
TTTGCAGGACAATTGAATTAATTATCTCCG25776098CTCGTCGGTCCAACTCTGAAGATGAAAATCCTCTCTTAGAGTCTCCTTG
PV_ABb022F12.F PV_ABb Panicum virgatum genomic 5', genomic survey sequence.
JM797371.1:540-558
CATACACCACCCCTTAAACGACCTGACGTC540CTCGTCGGTCCAACTCTGACCATGTGTCATGTGCCACCGTCATATGCCA
Trifolium repens isolate ACLI19 chromosome 04_Occ.
CP125842.1:63474718-63474736
CCAATCAAGGAGCATCAAATCATCGACACA63474718CTCGTCGGTCCAACTCTGAAAGATGAAGTGATGAAAATCATGCCGGTTC
Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:58943145-58943163
CCAATCAAGGAGCATCAAATCATCGACACT58943145CTCGTCGGTCCAACTCTGAAAGACGAAGTGATGAAAATCATGCCGGTTC
Leistus spinibarbis genome assembly, chromosome: 9.
OW121800.1:2831120-2831138
AATTCGATTTACGTTTGCGTAATTTCAACT2831120CTCGTCGGTCCAACTCTGATGACAAATATTATTCGATTATGGATTAATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCAGAGTTGGACCGACGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCAGAGTTGGACCGACGAG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.166 | 0.157 | search_plus_done; http://172.18.8.135:50400/match?q=TCAGAGTTGGACCGACGAG&k=0&no_gap=0&offset=0&limit=50
0.315 | 0.149 | search_minus_done; http://172.18.8.135:50400/match?q=CTCGTCGGTCCAACTCTGA&k=0&no_gap=0&offset=0&limit=47
0.319 | 0.004 | cgi_end;

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