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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:35:14, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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GA__Ea0017A10f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ea0017A10f, mRNA sequence.
BG442345.1:456-475
TTTGCTCGTGCCGAATTCGGCACGAGCTTC456TCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTG
GR__Eb019B17.r GR__Eb Gossypium raimondii cDNA clone GR__Eb019B17 3', mRNA sequence.
CO116714.1:46-65
CCAGGCGAGAGAGACAGAGAGATCGCCTTC46TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
GR__Eb03H12.f GR__Eb Gossypium raimondii cDNA clone GR__Eb03H12 5', mRNA sequence.
CO122022.1:30-49
CAGGCGAGAGAGAGAGAGAGATCGCCTTC30TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
G.hir-8-10 DAA bolls drought stressed751 8-10 DAA cotton bolls from drought stressed plants Gossypium hirsutum cDNA, mRNA sequence.
DN803875.1:40-59
GAGAGAGAGAGAGAGATCGAGATCGCCTTC40TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
CM053F01 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence.
DR457278.1:34-53
AGAGAGAGAAGAGAGATCGAGATCGCCTTC34TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
EST1056282 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT545642.1:52-71
GAGAGAAAGAGAGAGATCGAGATCGCCTTC52TCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTG
EST1057359 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT546719.1:43-62
GAGAGAGAGAGAGAGATCGAGATCGCCTTC43TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
EST1057622 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT546982.1:67-86
GAGAGAAAGAGAGAGATCGAGATCGCCTTC67TCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTG
EST1057623 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT546983.1:67-86
GAGAGAAAGAGAGAGATCGAGATCGCCTTC67TCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTG
EST1058420 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT547780.1:15-34
TCGAGATCGCCTTC15TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
EST1058421 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT547781.1:15-34
TCGAGATCGCCTTC15TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
EST1066073 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT555433.1:25-44
GAGAGAGAGATCGAGATCGCCTTC25TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
EST1070549 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT559909.1:77-96
GAGAGAAAGAGAGAGATCGAGATCGCCTTC77TCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTG
EST1075090 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT564450.1:55-74
GAGAGAGAGAGAGAGATCGAGATCGCCTTC55TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
EST1077564 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT566924.1:16-35
ATCGAGATCGCCTTC16TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
EST1078340 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT567700.1:42-61
GAGAGAGAGAGAGAGATCGAGATCGCCTTC42TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
EST1078374 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT567734.1:55-74
GAGAGAGAGAGAGAGATCGAGATCGCCTTC55TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
EST1079933 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT569293.1:61-80
GAGAGAGAGAGAGAGAGAGAGATCGCCTTC61TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
EST1080614 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT569974.1:45-64
GAGAGAAAGAGAGAGATCGAGATCGCCTTC45TCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTG
EST1082112 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT571472.1:13-32
GAGATCGCCTTC13TCAGGCTTTTGTGCCCTAAGTTGCAGAATTTTCACTTTTCTCGCTGTAAA
UFL_505_29 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES799024.1:35-54
GAGAGAGAGAGAGAGATCGAGATCGCCTTC35TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
UFL_340_53 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES832495.1:56-75
GAGAGAAAGAGAGAGATCGAGATCGCCTTC56TCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTG
UFL_692_81 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES850376.1:25-44
GGCACGAGCTCGTGCCGCGCCTTC25TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
127D08 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence.
EV487790.1:27-46
GAGAGAGAGAGATCGAGATCGCCTTC27TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
sg152C05 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence.
EV498890.1:59-78
GAGAGAAAGAGAGAGATCGAGATCGTCTTC59TCAGGCTTTTGTGCCCTAAGAATTTCACTTTTCTCGCTGTAAATAAGTGC
H11_P10_094 Cotton 1-14 day post anthesis Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence.
EX165154.1:69-88
AAAGAATTCGGCACGAGCGAGATCGCCTTC69TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
EST006598 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 32-D23 5', mRNA sequence.
GR713398.1:64-83
GAGAGAGAGAGAGAGATCGAGATCGCCTTC64TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
1P6-7-H2-T3 Subtracted cDNA library from Gossypium hirsutum L. variety Bikaneri Narma Gossypium hirsutum cDNA, mRNA sequence.
JG453112.1:16-35
ATCGAGATCGCCTTC16TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
mhczaa0_003401.z1.scf cDNA Library of Shixiya I in the Whole-life Cycle Gossypium arboreum cDNA clone mhczaa0_003401.z1, mRNA sequence.
JG852555.1:195-214
GAGAGAAAGAGAGAGATCGAGATCGCCTTC195TCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTG
A03-058A3 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK790732.1:65-84
GAGAGAAAGAGAGAGATCGAGATCGCCTCC65TCAGGCTTTTGTGCCCTAAGGGGGAATAGCCGCTTGCTGCATGTTTCAAG
A01-089A1 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK790845.1:71-90
GAGAGAAAGAGAGAGATCGAGATCGCCTTC71TCAGGCTTTTGTGCCCTAAGTTGCAGAATTTTCACTTTTCTCGCTGTAAA
B04-36B04 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK791227.1:96-115
GAGAGAGAGAGAGAGATCGAGATCGCCTTC96TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
E11-77E11 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK793253.1:96-115
GAGAGAGAGAGAGAGATCGAGATCGCCTTC96TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
H01-071H1 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK794365.1:96-115
GAGAGAGAGAGAGAGATCGAGATCGCCTTC96TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
F02-14-F02 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK794712.1:100-119
GAGAGAGAGAGAGAGATCGAGATCGCCTTC100TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
C03-083C3 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK795066.1:96-115
GAGAGAGAGAGAGAGATCGAGATCGCCTTC96TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
ndcxc0_0023_D11.ab1 Upland cotton seedling roots at 0h control (ndcxc) Gossypium hirsutum cDNA 5', mRNA sequence.
JZ375803.1:69-88
GAGAGAAAGAGAGAGATCGAGATCGCCTTC69TCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTG
ndcxe0_0024_E11.ab1 Upland cotton seedling roots at 3h control (ndcxe) Gossypium hirsutum cDNA 5', mRNA sequence.
JZ381567.1:64-83
GAGAGAAAGAGAGAGATCGAGATCGCCTTC64TCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTG
ndcxe0_0031_C02.ab1 Upland cotton seedling roots at 3h control (ndcxe) Gossypium hirsutum cDNA 5', mRNA sequence.
JZ382139.1:53-72
GAGAGAAAGAGAGAGATCGAGATCGCCTTC53TCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTG
ndcxf0_0032_F09.ab1 Upland cotton seedling roots at salt stress 12h (ndcxf) Gossypium hirsutum cDNA 5', mRNA sequence.
JZ385120.1:68-87
GAGAGAGAGAGAGAGATCGAGATCGCCTTC68TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTG
ndcxg0_0017_C05.ab1 Upland cotton seedling roots at 12h control (ndcxg) Gossypium hirsutum cDNA 5', mRNA sequence.
JZ386981.1:41-60
GAGAGAGAGAGAGAGATCGAGATCGCCTTC41TCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAGGTG
Gossypium raimondii isolate D5-4 chromosome D5_11.
CP032563.1:2961996-2962015
CAAGGCGAGAGAGAGAGAGAGATCGCCTTC2961996TCAGGCTTTTGTGCCCTAAGGTAAATTTTTTGTTCCCCATTTGTTCTTCT
Gossypium herbaceum isolate Zhongcao1 chromosome 11.
CP106686.1:3061802-3061821
GAGAGAAAGAGAGAGATCGAGATCGCCTTC3061802TCAGGCTTTTGTGCCCTAAGGTAAATTTTTTGTTCCCCATTTGTTCTTCT
rmhcyb0_000365 SSH library of differentially expressed genes response to medium changes during cotton somatic embryogenesis Gossypium hirsutum cDNA clone rmhcyb0_000365, mRNA sequence.
FG551397.1:463-482
CACTTATTTACAGCGAGAAAAGTGAGAATT463CTTAGGGCACAAAAGCCTGAGAAGGCGATCTCGATCTCTCTCTCTCACCT
Gossypium hirsutum clone BAC Chr11_10_CM140_NAU1232 sequence, *** SEQUENCING IN PROGRESS ***, 10 unordered pieces.
MW008618.1:47496-47515
AGAAGAACAAATGGGGAACAAAAAATTTAC47496CTTAGGGCACAAAAGCCTGAGAAGGCGATCTCGATCTCTCTCTTTCTCTC
Gossypium turneri isolate D10-2 chromosome D10_11.
CP032581.1:65661687-65661706
AGAAGAACAAATGGGGAACAAAAAATTTAC65661687CTTAGGGCACAAAAGCCTGAGAAGGCGATCTCGATCTCTCTCTCTCTCTC
Gossypium herbaceum isolate GPA1alz chromosome 11.
CP106704.1:123221121-123221140
AGAAGAACAAATGGGGAACAAAAAATTTAC123221121CTTAGGGCACAAAAGCCTGAGAAGGCGATCTCGATCTCTCTCTTTCTCTC
Gossypium bickii isolate GPG1lz chromosome 11.
CP106711.1:131954620-131954639
AGAATAACAAATGGGGAACAAAAAATTTAC131954620CTTAGGGCACAAAAGCCTGAGAAGGCGATCTCGATCTCTCTCTCTCTCTC
Gossypium rotundifolium isolate GPK201 chromosome 11.
CP106732.1:1278500-1278519
CAGAAGAACAAATGGGACACAAAAATTTAC1278500CTTAGGGCACAAAAGCCTGAGAAGGCGATCTCGATCTCTCTCTCTCTCTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCAGGCTTTTGTGCCCTAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCAGGCTTTTGTGCCCTAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
2.791 | 2.782 | search_plus_done; http://172.18.8.135:50400/match?q=TCAGGCTTTTGTGCCCTAAG&k=0&no_gap=0&offset=0&limit=50
2.998 | 0.206 | search_minus_done; http://172.18.8.135:50400/match?q=CTTAGGGCACAAAAGCCTGA&k=0&no_gap=0&offset=0&limit=7
3.002 | 0.004 | cgi_end;

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