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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:03:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:8968824-8968843
GTTTGAATTAGTCTTTGATTGCTTTGCTCT8968824TCCAAAATGGCGTACCTCTCTCATTCTCTCATCAGGCTTCATCAACAGCA
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:9804038-9804057
GTTTGAATTAGTCTTTGATTGTTTTGCTCT9804038TCCAAAATGGCGTACCTCTCTCATTCTCTCATCAGGCTTCATCAACAGCA
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:9187941-9187960
GTTTGAATTAGTCTTTGATTGTTTTGCTCT9187941TCCAAAATGGCGTACCTCTCTCATTCTCTCATCAGGCTTCATCAACAGCA
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:10006654-10006673
GTTTGAATTAGTCTTTGATTGCTTTGCTCT10006654TCCAAAATGGCGTACCTCTCTCATTCCCTCATCAGGCTTCATCAACAGCA
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:9098573-9098592
GTTTGAATTAGTCTTTGATTGCTTTGCTCT9098573TCCAAAATGGCGTACCTCTCTCATTCCCTCATCAGGCTTCATCAACAGCA
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:9254312-9254331
GTTTGAATTAGTCTTTGATTGCTTTGCTCT9254312TCCAAAATGGCGTACCTCTCTCATTCTCTCATCAGGCTTCATCAACAGCA
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:9217890-9217909
GTTTGAATTAGTCTTTGATTGCTTTGCTCT9217890TCCAAAATGGCGTACCTCTCTCATTCCCTCATCAGGCTTCATCAACAGCA
Malus domestica genome assembly, chromosome: 11.
OU696687.1:9902919-9902938
GTTTGAATTAGTCTTTGATTGTTTTGCTCT9902919TCCAAAATGGCGTACCTCTCTCATTCTCTCATCAGGCTTCATCAACAGCA
Malus domestica genome assembly, chromosome: 11.
OU744552.1:9948190-9948209
GTTTGAATTAGTCTTTGATTGCTTTGCTCT9948190TCCAAAATGGCGTACCTCTCTCATTCCCTCATCAGGCTTCATCAACAGCA
Malus domestica genome assembly, chromosome: 11.
OU744963.1:9719926-9719945
GTTTGAATTAGTCTTTGATTGCTTTGCTCT9719926TCCAAAATGGCGTACCTCTCTCATTCCCTCATCAGGCTTCATCAACAGCA
Malus domestica genome assembly, chromosome: 11.
OU745001.1:9822443-9822462
GTTTGAATTAGTCTTTGATTGCTTTGCTCT9822443TCCAAAATGGCGTACCTCTCTCATTCCCTCATCAGGCTTCATCAACAGCA
Macrobrachium nipponense isolate FS-2020 chromosome 23.
CP062038.1:80439020-80439039
ACGGCTAAATAACACTCATTTATCCACAGG80439020TCCAAAATGGCGTACCTCTCCTACTTCACTCAATACACCACTGAGGAAGG
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:32009065-32009084
TGCTGTTGATGAAGCCTGATGAGAGAATGA32009065GAGAGGTACGCCATTTTGGAAGAGCAAAACAATCAAAGACTAATTCAAAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCCAAAATGGCGTACCTCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCAAAATGGCGTACCTCTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.174 | 0.165 | search_plus_done; http://172.18.8.135:50400/match?q=TCCAAAATGGCGTACCTCTC&k=0&no_gap=0&offset=0&limit=50
0.260 | 0.086 | search_minus_done; http://172.18.8.135:50400/match?q=GAGAGGTACGCCATTTTGGA&k=0&no_gap=0&offset=0&limit=38
0.261 | 0.001 | cgi_end;

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