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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 07:01:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KBrH096A17R Brassica rapa BAC library KBrH Brassica rapa genomic clone KBrH096A17, genomic survey sequence.
DU111886.1:22-43
ATTTTTCTGAAAACTTAATCA22TCGTTCTCGAATGTGAATTGTCTAAACATCCTTTTTATATATACAAAACTTG
Brassica napus cultivar Xiang5A chromosome 1.
CP123876.1:36865408-36865429
TTTATTGTTGCTTTTCTAGAAACTTAATCA36865408TCGTTCTCGAATGTGAATTGTCTAAACTTTCCTTTTATTTATTGTCTTTGCT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH080L24, complete sequence.
AC155345.1:58090-58111
CAAGTTTTGTATATATAAAAAGGATGTTTA58090GACAATTCACATTCGAGAACGATGATTAAGTTTTCAGAAAAATAACAATAAA
Brassica napus cultivar Xiang5A chromosome 17.
CP123892.1:12805162-12805183
CAAGTTTTGTATATATAAAAAGGATGTTTA12805162GACAATTCACATTCGAGAACGATGATTAAGTTTTCAGAAAAATAACAATAAA
Brassica napus genome assembly, chromosome: A05.
HG994359.1:12785595-12785616
CAAGTTTTGTATATATAAAAAGGATGTTTA12785595GACAATTCACATTCGAGAACGATGATTAAGTTTTCAGAAAAATAACAATAAA
Brassica rapa genome, scaffold: A09.
LR031568.1:39586791-39586812
CAAGTTTTGTGTATATAAAAGGAATGTTTA39586791GACAATTCACATTCGAGAACGATGATTAAGTTTCCAAAAAAATAACAATAAA
Brassica rapa genome, scaffold: A05.
LR031570.1:18527750-18527771
CAAGTTTTGTATATATAAAAAGGATGTTTA18527750GACAATTCACATTCGAGAACGATGATTAAGTTTTCAGAAAAATAACAATAAA
Brassica rapa genome assembly, chromosome: A05.
LS974621.2:12617904-12617925
CAAGTTTTGTATATATAAAAAGGATGTTTA12617904GACAATTCACATTCGAGAACGATGATTAAGTTTTCAGAAAAATAACAATAAA
Brassica rapa genome assembly, chromosome: A09.
LS974625.2:50035345-50035366
CAAGTTTTGTGTATATAAAAGGAATGTTTA50035345GACAATTCACATTCGAGAACGATGATTAAGTTTCCAAAAAAATAACAATAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCGTTCTCGAATGTGAATTGTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCGTTCTCGAATGTGAATTGTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.368 | 0.359 | search_plus_done; http://172.18.8.135:50400/match?q=TCGTTCTCGAATGTGAATTGTC&k=0&no_gap=0&offset=0&limit=50
0.488 | 0.120 | search_minus_done; http://172.18.8.135:50400/match?q=GACAATTCACATTCGAGAACGA&k=0&no_gap=0&offset=0&limit=48
0.492 | 0.004 | cgi_end;

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