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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:28:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

KS24018C08 KS24 Capsicum annuum cDNA, mRNA sequence.
GD119556.1:265-284
TTTAAGTCCATCTTATCTGTTTTGAGAAAA265TCTCGATTTTGCGATCTTCAGCACTTTACCTACAATTGTCTTGGGAATTA
Capsicum annuum Takanotsume DNA, chromosome 5, sequence.
AP026700.1:113211989-113212008
TTTAAGTCCATCTTATCTGTTTTGAGAAAA113211989TCTCGATTTTGCGATCTTCAGCACTTTACCTACAATTGTCTTGGGAATTA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 5.
CP124727.1:112988904-112988923
TTTAAGTCCATCTTATCTGTTTTGAGAAAA112988904TCTCGATTTTGCGATCTTCAGCACTTTACCTACAATTGTCTTGGGAATTA
Sphenostylis stenocarpa genome assembly, chromosome: 3.
OY731400.1:25909372-25909391
AGACCACCGTTTGGGATTTTGGGACGACGG25909372TCTCGATTTTGCGATCTTCAGGACCACCGTCTGGAAAGCAAGACGATGGT
Hofmannophila pseudospretella genome assembly, chromosome: 12.
OX376323.1:7794852-7794871
TCTCTTTTTAGAAAGCTCTCTTTCTAGAAA7794852TCTCGATTTTGCGATCTTCACATATTCCTACCTGTACAACTGGATATACG
TSA: Capsicum annuum MGMT_Contig37025 mRNA sequence.
JW087269.1:1372-1391
TAATTCCCAAGACAATTGTAGGTAAAGTGC1372TGAAGATCGCAAAATCGAGATTTTCTCAAAACAGATAAGATGGACTTAAA
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 6.
CP124714.1:119054636-119054655
TAATTCCCAAGACAATTGTAGGTTAAGTGC119054636TGAAGATCGCAAAATCGAGATTTTCTCAAACAGATAAGATGGACTTAAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTCGATTTTGCGATCTTCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTCGATTTTGCGATCTTCA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.387 | 0.378 | search_plus_done; http://172.18.8.135:50400/match?q=TCTCGATTTTGCGATCTTCA&k=0&no_gap=0&offset=0&limit=50
0.484 | 0.097 | search_minus_done; http://172.18.8.135:50400/match?q=TGAAGATCGCAAAATCGAGA&k=0&no_gap=0&offset=0&limit=45
0.485 | 0.002 | cgi_end;

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