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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:24:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Humulus lupulus genome assembly, chromosome: X.
OY720650.1:203156512-203156531
CTCATCATGCAACTTCAGTGCTTGGTTTCT203156512TCTTGGAAAAGATCCCTCCTATCAAAGGAATCAAAGGCTTCTTCTTCTTC
Athripsodes cinereus genome assembly, chromosome: 10.
OX388314.1:6513807-6513826
CTATATAAGATCAGTCATCTTGATCTGTTG6513807TCTTGGAAAAGATCCCTCCTGCGACGCTGATTTCACATCTCTTAGATGCT
TSA: Cannabis sativa PK04485.1_1.CasaPuKu mRNA sequence.
JP450128.1:797-816
GAAGAAGAAGAAGCCTTTGATTCCATTAAT797AGGAGGGATCTTTTCCAAGAAGAAACCAAGCACCGAAGTTGCATGAGACC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295787_c0_seq2.
LA658960.1:1308-1327
GAAGAAGAAGAAGCCTTTGATTCCTTTGAT1308AGGAGGGATCTTTTCCAAGAAGAAACCAAGCACTGAAGTTGCATGATGAG
Corylus avellana genome assembly, chromosome: ca11.
LR899433.1:6810882-6810901
TTTTTTTTAATTGAATAAGAAAAGGGCTAC6810882AGGAGGGATCTTTTCCAAGAAATCCTGAAAACGAAAAAGGGGTGGACTCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTTGGAAAAGATCCCTCCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTTGGAAAAGATCCCTCCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.165 | 0.156 | search_plus_done; http://172.18.8.135:50400/match?q=TCTTGGAAAAGATCCCTCCT&k=0&no_gap=0&offset=0&limit=50
0.261 | 0.096 | search_minus_done; http://172.18.8.135:50400/match?q=AGGAGGGATCTTTTCCAAGA&k=0&no_gap=0&offset=0&limit=48
0.263 | 0.002 | cgi_end;

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