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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 19:47:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH014M07, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC189600.2:84614-84634
GCGTGAGAGTGACGATAATATCACACCTAA84614TGAGTATCTCTCTTGGCAAACAAATAAAATCTTTAACGTACGCTTGACATG
Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 82 unordered pieces.
FJ789651.1:272530-272550
GCGTGAGAGTGACGATAATATCACACCTAA272530TGAGTATCTCTCTTGGCAAACAAATAAAATCTTTAACGTACGCTTGACATG
Brassica napus cultivar Xiang5A chromosome 16.
CP123891.1:59003652-59003672
TTTTACGATTCTTCTGAATTTGGAATCTAA59003652TGAGTATCTCTCTTGGCAAACAATAAAATCTTTAACGTACGCTTGACATGT
Rhinatrema bivittatum genome assembly, chromosome: 4.
LR584390.1:356684995-356685015
ATTTTAACAGGGGCTGGGATATCTAAAGTG356684995GTTTGCCAAGAGAGATACTCAGCAGCTACTGCCCTGTAAAATCATACTACA
lkg99c01.b1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BZ074740.1:497-517
ACATGTCAAGCGTACGTTAAAGATTTTATT497GTTTGCCAAGAGAGATACTCATTAGATTCCAAATTCAGAAGAATCGTAAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGAGTATCTCTCTTGGCAAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGAGTATCTCTCTTGGCAAAC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.348 | 0.339 | search_plus_done; http://172.18.8.135:50400/match?q=TGAGTATCTCTCTTGGCAAAC&k=0&no_gap=0&offset=0&limit=50
0.446 | 0.099 | search_minus_done; http://172.18.8.135:50400/match?q=GTTTGCCAAGAGAGATACTCA&k=0&no_gap=0&offset=0&limit=47
0.448 | 0.001 | cgi_end;

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