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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:44:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Bos mutus isolate yakQH1 chromosome X.
CP027098.1:17883827-17883846
GAGGTACGGGATATAGGATGTGTGCACTGT17883827TGCCCTGGGAGTGATCACTACGCAGATACTGTCAACCTACCATTTTGGAA
Bos taurus genome assembly, chromosome: 21.
LR962752.1:3204837-3204856
GAGGTACGGGATATAGGATGTGTGCACTGT3204837TGCCCTGGGAGTGATCACTACACAGATACTGTCAACCTACCATTTTGGAA
Bos gaurus x Bos taurus genome assembly, chromosome: X.
OX258984.1:20444254-20444273
GAGGTACGGGATATAGGATGTGTGCACTGT20444254TGCCCTGGGAGTGATCACTACACAGATACTGTCAACCTACCATTTTGGAA
Bos taurus genome assembly, chromosome: BtaX.
OY997258.1:20629937-20629956
GAGGTACGGGATATAGGATGTGTGCACTGT20629937TGCCCTGGGAGTGATCACTACACAGATACTGTCAACCTACCATTTTGGAA
Bos taurus clone CH240-403C12, WORKING DRAFT SEQUENCE, 14 unordered pieces.
AC221309.1:143388-143407
GAGGTACGGGATATAGGATGTGTGCACTGT143388TGCCCTGGGAGTGATCACTACACAGATACTGTCAACCTACCATTTTGGAA
Bos taurus strain mammals genome assembly, chromosome: X.
OX344689.1:29805005-29805024
TTCCAAAATGGTAGGTTGACAGTATCTGTG29805005TAGTGATCACTCCCAGGGCAACAGTGCACACATCCTATATCCCGTACCTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCCCTGGGAGTGATCACTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCCCTGGGAGTGATCACTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.360 | 0.351 | search_plus_done; http://172.18.8.135:50400/match?q=TGCCCTGGGAGTGATCACTA&k=0&no_gap=0&offset=0&limit=50
0.453 | 0.093 | search_minus_done; http://172.18.8.135:50400/match?q=TAGTGATCACTCCCAGGGCA&k=0&no_gap=0&offset=0&limit=45
0.454 | 0.001 | cgi_end;

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