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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 13:03:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

CGN-43672 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w20a20 5', mRNA sequence.
DV698091.1:596-617
CAGCAGCAGCAGCAGCAGCAACCGCAGCAC596CACCTGGACAACAACAACGGCAGCTCCACTCCAATGGAGAAAATGCTAAAAC
CC-L01_023_F05 Coffea young leaves Coffea canephora cDNA clone CC-L01_023_F05, mRNA sequence.
EE193462.1:107-128
CAGCAGCAGCAGCAGCAGCAACCGCAGCAC107CACCTGGACAACAACAACGGCAGCTCCACTCCAATGGAGAAAATGCTAAAAC
CA00-XX-RX1-028-C07-EB.F Coffea arabica RX1 Coffea arabica cDNA clone CA00-XX-RX1-028-C07-EB, mRNA sequence.
GW443200.1:214-235
CAGCAGCAGCAGCAGCAGCAACCGCAGCAC214CACCTGGACAACAACAACGGCAGCTCCACTCCAATGGAGAAGATGCTAAAAC
CA00-XX-BP1-026-F01-BM.F Coffea arabica BP1 Coffea arabica cDNA clone CA00-XX-BP1-026-F01-BM, mRNA sequence.
GW454387.1:322-343
CAGCAGCAGCAGCAGCAGCAACCGCAGCAC322CACCTGGACAACAACAACGGCAGCTCCACTCCAATGGAGAAGATGCTAAAAC
CA00-XX-FR1-001-A07-MC.F Coffea arabica FR1 Coffea arabica cDNA clone CA00-XX-FR1-001-A07-MC, mRNA sequence.
GW487100.1:322-343
CAGCAGCAGCAGCAGCAGCAACCGCAGCAC322CACCTGGACAACAACAACGGCAGCTCCACTCCAATGGAGAAGATGCTAAAAC
CA00-XX-FR1-008-D02-BG.F Coffea arabica FR1 Coffea arabica cDNA clone CA00-XX-FR1-008-D02-BG, mRNA sequence.
GW487535.1:322-343
CAGCAGCAGCAGCAGCAGCAACCGCAGCAC322CACCTGGACAACAACAACGGCAGCTCCACTCCAATGGAGAAGATGCTAAAAC
Rhodoferax sp. BAB1 chromosome, complete genome.
CP054424.1:1913614-1913635
GAGCGTGACGAATTCTCGGCCGGTTTCTAC1913614CACCTGGACAACAACAACGGCATGAACTACGGCATGCCCTGGATCCGCCCCT
Hydrogenophaga taeniospiralis strain LT2 chromosome, complete genome.
CP075183.1:3017984-3018005
GAGCGCAACGAGTTCCAGGTCAACCTCTAC3017984CACCTGGACAACAACAACGGCATCAACTACGGCATTCCGTACATCGCGCCCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCCGTTGTTGTTGTCCAGGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCCGTTGTTGTTGTCCAGGTG | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.323 | 0.314 | search_plus_done; http://172.18.8.135:50400/match?q=TGCCGTTGTTGTTGTCCAGGTG&k=0&no_gap=0&offset=0&limit=50
0.826 | 0.503 | search_minus_done; http://172.18.8.135:50400/match?q=CACCTGGACAACAACAACGGCA&k=0&no_gap=0&offset=0&limit=50
0.832 | 0.006 | cgi_end;

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