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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 20:46:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

KS13036H10 KS13 Capsicum annuum cDNA, mRNA sequence.
GD054950.1:69-88
TCATTTTAAATTACAATCATAACCATCAAA69TGCGGTGTGCTAAATAGTGCCAAAAGTAGTTGATTACTGAACATTAATAG
TSA: Capsicum annuum MGMT_Contig38924 mRNA sequence.
JW089168.1:139-158
TCATTTTAAATTACAATCATAACCATCAAA139TGCGGTGTGCTAAATAGTGCCAAAAGTAGTTGATTACTGAACATTAATAG
Capsicum annuum Takanotsume DNA, chromosome 12, sequence.
AP026707.1:261584060-261584079
TCATTTTAAATTACAATCATAACCATCAAA261584060TGCGGTGTGCTAAATAGTGCCAAAAGTAGTTGATTACTGAACATTAATAG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 12.
CP124720.1:1092370-1092389
TCATTTTAAATTACAATCATAACCATCAAA1092370TGCGGTGTGCTAAATAGTGCCAAAAGTAGTTGATTACTGAATATTAATAG
Capsicum annuum Takanotsume DNA, chromosome 12, sequence.
AP026707.1:261692215-261692234
CTATTAATGTTCAGTAATCAACTACTTTTG261692215GCACTATTTAGCACACCGCATTTGATGGTTATGATTGTAATTTAAAATGA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 12.
CP124720.1:1218304-1218323
CTATTAATGTTCAGTAATCAACTACTTTTG1218304GCACTATTTAGCACACCGCATTTGATGGTTATGATTGTAATTTAAAATGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCGGTGTGCTAAATAGTGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCGGTGTGCTAAATAGTGC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.274 | 0.265 | search_plus_done; http://172.18.8.135:50400/match?q=TGCGGTGTGCTAAATAGTGC&k=0&no_gap=0&offset=0&limit=50
0.366 | 0.093 | search_minus_done; http://172.18.8.135:50400/match?q=GCACTATTTAGCACACCGCA&k=0&no_gap=0&offset=0&limit=46
0.368 | 0.001 | cgi_end;

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