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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-05 21:17:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2501443-2501462
GCAAGTATTTGAGCAGCATGCATTCTTGAA2501443TGCTAACGACAGACCACCAAACTACGAGTTACTTAGGAAGAAAATTGTTG
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2622587-2622606
GCAAGTATTTGAGCAGCATGCATTCTTGAA2622587TGCTAACGACAGACCACCAAACTACGAGTTACTTAGGAAGAAAATTGTTG
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2620889-2620908
GCAAGTATTTGAGCAGCATGCATTCTTGAA2620889TGCTAACGACAGACCACCAAACTACGAGTTACTTAGGAAGAAAATTGTTG
Malus domestica genome assembly, chromosome: 11.
OU745001.1:2678308-2678327
GCAAGTATTTGAGCAGCATGCATTCTTGAA2678308TGCTAACGACAGACCACCAAACTACGAGTTACTTAGGAAGAAAATTGTTG
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:38581817-38581836
CAACAATTTTCTTCCTAAGTAACTCGTAGT38581817TTGGTGGTCTGTCGTTAGCATTCAAGAATGCATGCTGCTCAAATACTTGC
Crataegus laevigata genome assembly, chromosome: 6.
OY756943.1:38405385-38405404
CAACAATTTTCTCCTTAAGTAACTCGTAGT38405385TTGGTGGTCTGTCGTTAGCATTCAAGAATGCATGCTGCTCAAATACTTGC
Cheilosia variabilis genome assembly, chromosome: 1.
OX579676.1:102391653-102391672
TGACATTCGGCCGGCCGTTCTGAATTTTGA102391653TTGGTGGTCTGTCGTTAGCAACTTTTTTTGTAGCTCACACGTATTCACAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCTAACGACAGACCACCAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCTAACGACAGACCACCAA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.322 | 0.313 | search_plus_done; http://172.18.8.135:50400/match?q=TGCTAACGACAGACCACCAA&k=0&no_gap=0&offset=0&limit=50
0.427 | 0.105 | search_minus_done; http://172.18.8.135:50400/match?q=TTGGTGGTCTGTCGTTAGCA&k=0&no_gap=0&offset=0&limit=46
0.429 | 0.002 | cgi_end;

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