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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:31:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 3701 from patent US 9551006.
KH516271.1:1262-1287
GACTGTTGGAATTGCCATTGTTAGTTGGAT1262TGCTCTACCATCTTCCTTCACCATCTTCAATTTTGGGACTCAGAAAGTTGTTAAGA
Sequence 3701 from patent US 10457952.
MO459447.1:1262-1287
GACTGTTGGAATTGCCATTGTTAGTTGGAT1262TGCTCTACCATCTTCCTTCACCATCTTCAATTTTGGGACTCAGAAAGTTGTTAAGA
m.07.E14.5 MPer183 cassava lambda zap Manihot esculenta cDNA 5', mRNA sequence.
CK652175.1:53-78
GACTGTTGGAATTGCCATTGTTAGTTGGAT53TGCTCTACCATCTTCCTTCACCATCTTCAATTTTGGGACTCAGAAAGTTGTTAAGA
m.09.C6.5 MPer183 cassava lambda zap Manihot esculenta cDNA 5', mRNA sequence.
CK652538.1:59-84
GACTGTTGGAATTGCCATTGTTAGTTGGAT59TGCTCTACCATCTTCCTTCACCATCTTCAATTTTGGGACTCAGAAAGTTGTTAAGA
m.09.L7.5 MPer183 cassava lambda zap Manihot esculenta cDNA 5', mRNA sequence.
CK652645.1:59-84
GACTGTTGGAATTGCCATTGTTAGTTGGAT59TGCTCTACCATCTTCCTTCACCATCTTCAATTTTGGGACTCAGAAAGTTGTTAAGA
43 Cassava root cDNA library Manihot esculenta cDNA 5' similar to vacuolar proton inorganic pyrophosphatase (H+ PPase), mRNA sequence.
DN740360.1:232-257
GACTGTTGGAATTGCCATTGTTAGTTGGAT232TGCTCTACCATCTTCCTTCACCATCTTCAATTTTGGGACTCAGAAAGTTGTTAAGA
TSA: Hevea brasiliensis Unigene1716_HB.Hebrbark mRNA sequence.
JR346000.1:378-403
TCTTAACAACTTTCTGAGTCCCGAAATTGA378AGATGGTGAAGGAAGATGGTAGAGCAATCCAACTAACAATGGCAATTCCAACAGTC
TSA: Hevea brasiliensis contig02269, mRNA sequence.
JT919673.1:1324-1349
TCTTAACAACTTTCTGAGTCCCGAAATTGA1324AGATGGTGAAGGAAGATGGTAGAGCAATCCAACTAACAATGGCAATTCCAACAGTC
TSA: Hevea brasiliensis contig32202, mRNA sequence.
JT923055.1:1324-1349
TCTTAACAACTTTCTGAGTCCCGAAATTGA1324AGATGGTGAAGGAAGATGGTAGAGCAATCCAACTAACAATGGCAATTCCAACAGTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCTCTACCATCTTCCTTCACCATCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCTCTACCATCTTCCTTCACCATCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.635 | 0.626 | search_plus_done; http://172.18.8.135:50400/match?q=TGCTCTACCATCTTCCTTCACCATCT&k=0&no_gap=0&offset=0&limit=50
0.771 | 0.136 | search_minus_done; http://172.18.8.135:50400/match?q=AGATGGTGAAGGAAGATGGTAGAGCA&k=0&no_gap=0&offset=0&limit=44
0.773 | 0.002 | cgi_end;

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