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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-15 15:28:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Trifolium repens isolate ACLI19 chromosome 04_Occ.
CP125842.1:215376-215395
ACTTCCGATCGACAAACACAGGTCCGGCGG215376TGGAAGTATGTTCCCGAAGGCTTTGATGCATAAAGCCGCCACCGCAAACA
Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:262195-262214
ACTTCCGATCGACAAACACAGATCCGGCGG262195TGGAAGTATGTTCCCGAAGGCTTTGATGCACAAAGCCACTGCGGCAAATA
Lactuca saligna genome assembly, chromosome: 8.
OX465084.1:176780387-176780406
ACATCCCTATGATGCAGTCCTAGTATGGAA176780387TGGAAGTATGTTCCCGAAGGTTTGACCTACATCCCTATGATGCAGTCCTA
Trifolium repens mRNA, clone: WCC15g10_059, unspecified EST.
FY459338.1:315-334
TATTTGCGGCGGCGGCTTTATGCATCAAAG315CCTTCGGGAACATACTTCCACCGCCGGACCTGTGTTTGTCGATCGGAAGT
Trifolium repens mRNA, clone: WCC21l10_062, unspecified EST.
FY461556.1:329-348
TATTTGCCGCAGTGGCTTTGTGCATCAAAG329CCTTCGGGAACATACTTCCACCGCCGGATCTGTGTTTGTCGATCGGAAGT
Trifolium repens mRNA, clone: WCC43f04_052, unspecified EST.
FY469286.1:314-333
TATTTGCCGCAGTGGCTTTGTGCATCAAAG314CCTTCGGGAACATACTTCCACCGCCGGATCTGTGTTTGTCGATCGGAAGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGGAAGTATGTTCCCGAAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGAAGTATGTTCCCGAAGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.106 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=TGGAAGTATGTTCCCGAAGG&k=0&no_gap=0&offset=0&limit=50
0.374 | 0.268 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTCGGGAACATACTTCCA&k=0&no_gap=0&offset=0&limit=47
0.376 | 0.002 | cgi_end;

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