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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:35:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB084M06, complete sequence.
AC189491.2:139902-139921
CATTTTTTTCCTTGGGTAACTTATGTAATC139902TGGCATTGACAGAGCTAGTAAGAGTTAAGACTAATACTAATTCTTGTTAT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB084M06, complete sequence.
AC189491.2:140492-140511
CATTTTTTTCCTTGGGTAACTTATGTAATC140492TGGCATTGACAGAGCTAGTAAGAGTTAAGACTAATACTAATTCTTGTTAT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB084M06, complete sequence.
AC189491.2:141124-141143
CATTTTTTTCCTTGGGTAACTTATGTAATC141124TGGCATTGACAGAGCTAGTAAGAGTTAAGACTAATACTAATTCTTGTTAT
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:20333697-20333716
TCCTTTTTTCCTTGGGTAACTTATGTAATC20333697TGGCATTGACAGAGCTAGTAAGAGTTAAGACTAATACTAATTCTTGTTAT
Brassica rapa genome, scaffold: A03.
LR031572.1:20091089-20091108
TCCTTTTTTCCTTGGGTAACTTATGTAATC20091089TGGCATTGACAGAGCTAGTAAGAGTTAAGACTAATACTAATTCTTGTTAT
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:20217773-20217792
TCCTTTTTTCCTTGGGTAACTTATGTAATC20217773TGGCATTGACAGAGCTAGTAAGAGTTAAGACTAATACTAATTCTTGTTAT
KBrB028G12F KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB028G12, genomic survey sequence.
DX031551.1:727-746
ATAACAAGAATTAGTATTAGTCTTAACTCT727TACTAGCTCTGTCAATGCCAGATTACATAAGTTACCCAAGGAAAAAAATG
KBrB067H16F KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB067H16, genomic survey sequence.
DX061055.1:736-755
ATAACAAGAATTAGTATTAGTCTTAACTCT736TACTAGCTCTGTCAATGCCAGATTACATAAGTTACCCAAGGAAAAAAATG
Protoeuglena noctilucae genome assembly, chromosome: 17.
OY253684.1:479276-479295
CCCCCCCCCCCCTGCGTCCTCTCATCGTGT479276TACTAGCTCTGTCAATGCCACGCCATATATCCCCATCTCTCTCATCTCTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGGCATTGACAGAGCTAGTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGCATTGACAGAGCTAGTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.195 | 0.187 | search_plus_done; http://172.18.8.135:50400/match?q=TGGCATTGACAGAGCTAGTA&k=0&no_gap=0&offset=0&limit=50
0.323 | 0.128 | search_minus_done; http://172.18.8.135:50400/match?q=TACTAGCTCTGTCAATGCCA&k=0&no_gap=0&offset=0&limit=44
0.325 | 0.002 | cgi_end;

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