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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-05 16:11:54, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Trifolium pratense DNA, clone:RC0206r.ab1.
DE244960.1:53-72
TTTGGAGGACATGACAATAGAGCAACTTCT53TGGGTCATTGCAAGCTTATGAGGAAAAGAAGAAGAAGAAGGAAGATATCG
Trifolium repens isolate ACLI19 chromosome 02_Occ.
CP125838.1:20103207-20103226
TTTGGAGGATATGACAATGGAGCAACTTCT20103207TGGGTCATTGCAAGCTTATGAAGAAAAGAAAAAGAAGAAGGAAGATATCG
Trifolium subterraneum genome assembly, chromosome: 5.
OX637465.1:23500819-23500838
TTTAGAGGCCATGACAATAGAGCAACTTCT23500819TGGGTCATTGCAAGCTTATGAGGAAAGGAAAAAGAAGAAGGAAGATATCG
Ebenus cretica genome assembly, chromosome: 1.
OZ197278.1:56710549-56710568
TTTGGAGACCATGACAATGGAGCAACTTCT56710549TGGGTCATTGCAAGCTTATGAGGAAAAGAAAAAGAAGAAGGAAGATATCG
Ebenus cretica genome assembly, chromosome: 1.
OZ197278.1:147805467-147805486
TTTGGAGACCATGACAATGGAGCAACTTCT147805467TGGGTCATTGCAAGCTTATGAGGAAAAGAAAAAGAAGAAGGAAGATATCA
Ebenus cretica genome assembly, chromosome: 3.
OZ197280.1:92430774-92430793
TTTGGAGACCATGACAATGGAGCAACTTCT92430774TGGGTCATTGCAAGCTTATGAGGAAAAGAAAAAGAAGAAGGATGATATCG
Ebenus cretica genome assembly, chromosome: 4.
OZ197281.1:29811314-29811333
TTTGGAGACCATGACAATGGAGCAACTTCT29811314TGGGTCATTGCAAGCTTATGAGGAAAAGAAAAAGAAGAAGGAAGATATCG
Ebenus cretica genome assembly, chromosome: 4.
OZ197281.1:98346697-98346716
TTTGGAGACCATGACAATGGAGCAACTTCT98346697TGGGTCATTGCAAGCTTATGAGGAAAAGAAAAAGAAGAAGGAAGATATCG
Ebenus cretica genome assembly, chromosome: 5.
OZ197282.1:83307739-83307758
TTTGGAGACCATGACAATGGAGCAACTTCT83307739TGGGTCATTGCAAGCTTATGAGGAAAAGAAAAAGAAGAAGGAAGATATCG
Ebenus cretica genome assembly, chromosome: 6.
OZ197283.1:62795657-62795676
TTTGGAGACCATGACAATGGAGCAACTTCT62795657TGGGTCATTGCAAGCTTATGAGGAAAAGAAAAAGAAGAAGGAAGATATCG
Ebenus cretica genome assembly, chromosome: 6.
OZ197283.1:83257791-83257810
TTTGGAGACCATGACAATGGAGCAACTTCT83257791TGGGTCATTGCAAGCTTATGAGGAAAAGAAAAAGAAGAAGGAAGATATCG
Lathyrus linifolius genome assembly, chromosome: 7.
OZ206521.1:451151301-451151320
TTAATAGGCCATGAGAATGGAGTAACTTCT451151301TGGGTCATTGCAAGCTTATGAATAAAAGAAAAACAAGAAGGAATATATCA
Matthiola sinuata genome assembly, chromosome: 1.
OZ209981.1:66099422-66099441
TTTGGAGACCATGACAGTGGAGCAACTTAT66099422TGGGTCATTGCAAGCTTATGAAAAAAGAAGGAAGATATTACCGAACAAGT
Succisa pratensis genome assembly, chromosome: 6.
OZ243862.1:172533346-172533365
TTTGGAGGCCATGACAATGGAGCAACTTCT172533346TGGGTCATTGCAAGCTTATGATGAAAAGAAAAAAAAAGAAACAAGATATC
Cnephasia asseclana genome assembly, chromosome: 26.
OZ280766.1:3944972-3944991
ATATCTTGTTGAACTAGTCAGTCATTCTTC3944972TGGGTCATTGCAAGCTTATGGTTCTGTGGTCTACATAATTAAGCTGTTGT
Trifolium pratense DNA, clone:RCG04274.
DE215565.1:105-124
TATCTTCCTTCTTCTTCTTCTTCTTTTCCT105CATAAGCTTGCAATGACCCAA
Trifolium pratense DNA, clone:RCG07873.
DE217413.1:288-307
CGATATCTTCCTTCTTCTTCTTCTTTTCCT288CATAAGCTTGCAATGACCCAAGAAGTTGCTCCATTG
Trifolium repens isolate ACLI19 chromosome 02_Pall.
CP125839.1:38633993-38634012
TGATATCTTCCTTTTTCTTTTTCTTTTCTT38633993CATAAGCTTGCAATGACCCAAGAAGTTGCTCCATTGTCATATCCTCCAAA
Trifolium repens isolate ACLI19 chromosome 06_0cc.
CP125846.1:35425670-35425689
CGATATCTTCCTTCTTCTTTTTCTTTTCTT35425670CATAAGCTTGCAATGACCCAAGAAGTTGCTCCATTGTCATATCCTCCAAA
Trifolium subterraneum genome assembly, chromosome: 5.
OX637465.1:49398540-49398559
CGATATCTTCCTTCTTCTTTTTCCTTTCCT49398540CATAAGCTTGCAATGACCCAAGAAGTTGCTCTATTGTCATGGCCTCCAAA
Trifolium dubium genome assembly, chromosome: 1.
OX638062.1:14090770-14090789
CGATATCTTCCTTCTTCTTTTTCTTTTCTT14090770CATAAGCTTGCAATGACCCAAGAAGTTGATCAATTGTCATCTCTTCCAAA
Ebenus cretica genome assembly, chromosome: 1.
OZ197278.1:112416469-112416488
CGATATCTTCCTTCTTCTTTTTCTTTTCCT112416469CATAAGCTTGCAATGACCCAAGAAGTTGCTCCATTGTCATGGTCTCCAAA
Ebenus cretica genome assembly, chromosome: 3.
OZ197280.1:100405723-100405742
CGATATCTTCCTTCTTCTTTTTCTTTTCCT100405723CATAAGCTTGCAATGACCCAAGAAGTTGCTCCATTGTCTTGGTCTCCAAA
Ebenus cretica genome assembly, chromosome: 4.
OZ197281.1:112563909-112563928
CGATATCTTCCTTCTTCTTTTTCTTTTCCT112563909CATAAGCTTGCAATGACCCAAGAAGTTGCTCCATTGTCATGGTCTCCAAA
Ebenus cretica genome assembly, chromosome: 4.
OZ197281.1:114935283-114935302
CGATATCTTCCTTCTTCTTTTTCTTTTCCT114935283CATAAGCTTGCAATGACCCAAGAAGTTGCTCCATTGTCATGGTCTCCAAA
Ebenus cretica genome assembly, chromosome: 5.
OZ197282.1:2622458-2622477
CGATATCTTCCTTCTTCTTTTTCTTTTCCT2622458CATAAGCTTGCAATGACCCAAGAAGTTGCTCCATTGTCATGGTCTCCAAA
Ebenus cretica genome assembly, chromosome: 5.
OZ197282.1:56855066-56855085
CGATATCTTCCTTCTTCTTTTTCATTTCCT56855066CATAAGCTTGCAATGACCCAAGAAGTTGCTCCATTGTCATGGTCTCCAAA
Ebenus cretica genome assembly, chromosome: 5.
OZ197282.1:56899885-56899904
CGATATCTTCCTTCTTCTTTTTCATTTCCT56899885CATAAGCTTGCAATGACCCAAGAAGTTGCTCCATTGTCATGGTCTCCAAA
Ebenus cretica genome assembly, chromosome: 5.
OZ197282.1:56945358-56945377
CGATATCTTCCTTCTTCTTTTTCATTTCCT56945358CATAAGCTTGCAATGACCCAAGAAGTTGCTCCATTGTCATGGTCTCCAAA
Ebenus cretica genome assembly, chromosome: 5.
OZ197282.1:93921915-93921934
CAATATCTTCCTTCTTCTTTTTCTTTTCCT93921915CATAAGCTTGCAATGACCCAAGAAGTTGCTCCATTGTCATGGTCTCCAAA
Ebenus cretica genome assembly, chromosome: 5.
OZ197282.1:120002226-120002245
CGATATCTTCCTTCTTCTTTTTCTTTTCCT120002226CATAAGCTTGCAATGACCCAAGAAGTTGCTCCATTGTCATGGTCTCCAAA
Ebenus cretica genome assembly, chromosome: 6.
OZ197283.1:40225414-40225433
CGATATCTTCCTTCTTCTTTTTCTTTTCCT40225414CATAAGCTTGCAATGACCCAAGAAGTTGCTCCATTGTCATGGTCTCCAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGGGTCATTGCAAGCTTATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGGTCATTGCAAGCTTATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.374 | 0.365 | search_plus_done; http://172.18.8.135:50900/match?q=TGGGTCATTGCAAGCTTATG&k=0&no_gap=0&offset=0&limit=50
0.617 | 0.243 | search_minus_done; http://172.18.8.135:50900/match?q=CATAAGCTTGCAATGACCCA&k=0&no_gap=0&offset=0&limit=35
0.629 | 0.012 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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