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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 06:31:38, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Bos taurus genome assembly, chromosome: 27.
LR962883.1:45238044-45238063
GCCTCATCTCACATTGAGGGGGGAATCTCA45238044TGGTGTTTCTCGAGTTCTGGCAGGAAGCTTTGTACTCCTCTCAAGTTGTG
CH240_426N19.T7 CHORI-240 Bos taurus genomic clone CH240_426N19, genomic survey sequence.
CC544439.1:381-400
GCCTCATCTCGCATTGAGGGGGGAATCACA381TGGTGTTTCTCGAGTTCTGGCAGGAAGCTTTGTACTCCTCTCAAGTTGTG
Bos taurus clone CH240-100H1, WORKING DRAFT SEQUENCE, 13 unordered pieces.
AC162355.3:117126-117145
GCCTCATCTCGCATTGAGGGGGGAATCACA117126TGGTGTTTCTCGAGTTCTGGCAGGAAGCTTTGTACTCCTCTCAAGTTGTG
Bos taurus clone CH240-17N19, WORKING DRAFT SEQUENCE, 10 unordered pieces.
AC174043.3:145879-145898
GCCTCATCTCGCATTGAGGGGGGAATCACA145879TGGTGTTTCTCGAGTTCTGGCAGGAAGCTTTGTACTCCTCTCAAGTTGTG
Daucus carota subsp. sativus cultivar DH1 chromosome 7.
CP093349.1:39265221-39265240
GATGATGGATCAAAATTGAGGTTTTAATGA39265221TGGTGTTTCTCGAGTTCTGGTTTTGTTAAAATTTACGGGCACAAGTTTTT
Daucus carota isolate Kuroda chromosome 7.
CP125307.1:39347029-39347048
GATGATGGATCAAAATTGAGGTTTTAATGA39347029TGGTGTTTCTCGAGTTCTGGTTTTGTTAAAATTTACGGGCACAAGTTTTT
Bos taurus genome assembly, chromosome: 27.
LR962758.1:83517-83536
CACAACTTGAGAGGAGTACAAAGCTTCCTG83517CCAGAACTCGAGAAACACCATGTGATTCCCCCCTCAATGCGAGATGAGGC
Bos gaurus x Bos taurus genome assembly, chromosome: 27.
OX258981.1:587720-587739
CACAACTTGAGAGGAGTACAAAGCTTCCTG587720CCAGAACTCGAGAAACACCATGTGATTCCCCCCTCAATGCGAGATGAGGC
Bos taurus strain mammals genome assembly, chromosome: 27.
OX344716.1:1169952-1169971
CACAACTTGAGAGGAGTACAAAGCTTCCTG1169952CCAGAACTCGAGAAACACCATGTGATTCCCCCCTCAATGCGAGATGAGGC
Bos taurus genome assembly, chromosome: Bta27.
OY997255.1:961866-961885
CACAACTTGAGAGGAGTACAAAGCTTCCTG961866CCAGAACTCGAGAAACACCATGTGATTCCCCCCTCAATGCGAGATGAGGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGGTGTTTCTCGAGTTCTGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGTGTTTCTCGAGTTCTGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.344 | 0.335 | search_plus_done; http://172.18.8.135:50400/match?q=TGGTGTTTCTCGAGTTCTGG&k=0&no_gap=0&offset=0&limit=50
0.447 | 0.103 | search_minus_done; http://172.18.8.135:50400/match?q=CCAGAACTCGAGAAACACCA&k=0&no_gap=0&offset=0&limit=44
0.450 | 0.003 | cgi_end;

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